Analysis of interatomic Contacts of Structural Units in PDB entry:
6I1C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I1C entry

There are 3 chains in PDB entry 6I1C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 72LYS 179
B
 GLY 72PRO 177
C
 GLY 70LYS 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6I1C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
80 88Right-handed alpha
Helix 2
AA2
A
102 119Right-handed alpha
Helix 3
AA3
A
133 141Right-handed alpha
Helix 4
AA4
A
164 176Right-handed alpha
Helix 5
AA5
B
80 88Right-handed alpha
Helix 6
AA6
B
102 119Right-handed alpha
Helix 7
AA7
B
133 140Right-handed alpha
Helix 8
AA8
B
164 174Right-handed alpha
Helix 9
AA9
C
80 88Right-handed alpha
Helix 10
AB1
C
102 113Right-handed alpha
Helix 11
AB2
C
115 117Right-handed 310
Helix 12
AB3
C
133 140Right-handed alpha
Helix 13
AB4
C
164 176Right-handed alpha
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There are 3 sheets in PDB entry 6I1C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
A
123 128parallel
Strand 3
A
93 98parallel
Strand 4
A
147 152anti-parallel
Strand 5
A
155 161anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 75first strand
Strand 2
B
123 128parallel
Strand 3
B
93 98parallel
Strand 4
B
149 152anti-parallel
Strand 5
B
155 159anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 76first strand
Strand 2
C
123 128parallel
Strand 3
C
93 98parallel
Strand 4
C
148 152anti-parallel
Strand 5
C
155 160anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il