Analysis of interatomic Contacts of Structural Units in PDB entry:
6I1K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I1K entry

There is 1 chain in PDB entry 6I1K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1TYR 1228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 6I1K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 7Right-handed 310
Helix 2
AA2
A
26 35Right-handed alpha
Helix 3
AA3
A
35 69Right-handed alpha
Helix 4
AA4
A
72 89Right-handed alpha
Helix 5
AA5
A
91 116Right-handed alpha
Helix 6
AA6
A
118 122Right-handed 310
Helix 7
AA7
A
136 148Right-handed alpha
Helix 8
AA8
A
161 172Right-handed alpha
Helix 9
AA9
A
175 178Right-handed 310
Helix 10
AB1
A
179 189Right-handed alpha
Helix 11
AB2
A
198 205Right-handed alpha
Helix 12
AB3
A
206 224Right-handed alpha
Helix 13
AB4
A
230 238Right-handed alpha
Helix 14
AB5
A
238 243Right-handed alpha
Helix 15
AB6
A
259 264Right-handed alpha
Helix 16
AB7
A
265 273Right-handed 310
Helix 17
AB8
A
274 287Right-handed alpha
Helix 18
AB9
A
299 312Right-handed alpha
Helix 19
AC1
A
315 320Right-handed 310
Helix 20
AC2
A
344 362Right-handed alpha
Helix 21
AC3
A
369 383Right-handed alpha
Helix 22
AC4
A
396 408Right-handed alpha
Helix 23
AC5
A
411 425Right-handed alpha
Helix 24
AC6
A
434 446Right-handed alpha
Helix 25
AC7
A
453 467Right-handed alpha
Helix 26
AC8
A
474 484Right-handed alpha
Helix 27
AC9
A
487 507Right-handed alpha
Helix 28
AD1
A
516 518Right-handed 310
Helix 29
AD2
A
519 540Right-handed alpha
Helix 30
AD3
A
541 543Right-handed 310
Helix 31
AD4
A
558 573Right-handed alpha
Helix 32
AD5
A
574 587Right-handed alpha
Helix 33
AD6
A
610 612Right-handed 310
Helix 34
AD7
A
613 618Right-handed alpha
Helix 35
AD8
A
642 649Right-handed alpha
Helix 36
AD9
A
664 674Right-handed alpha
Helix 37
AE1
A
685 694Right-handed alpha
Helix 38
AE2
A
713 731Right-handed alpha
Helix 39
AE3
A
733 738Right-handed 310
Helix 40
AE4
A
743 747Right-handed 310
Helix 41
AE5
A
749 761Right-handed alpha
Helix 42
AE6
A
770 781Right-handed alpha
Helix 43
AE7
A
790 794Right-handed 310
Helix 44
AE8
A
802 812Right-handed alpha
Helix 45
AE9
A
813 819Right-handed alpha
Helix 46
AF1
A
870 874Right-handed 310
Helix 47
AF2
A
895 907Right-handed alpha
Helix 48
AF3
A
908 911Right-handed 310
Helix 49
AF4
A
953 959Right-handed alpha
Helix 50
AF5
A
960 967Right-handed alpha
Helix 51
AF6
A
976 1000Right-handed alpha
Helix 52
AF7
A
1020 1037Right-handed alpha
Helix 53
AF8
A
1064 1068Right-handed 310
Helix 54
AF9
A
1101 1111Right-handed alpha
Helix 55
AG1
A
1131 1133Right-handed 310
Helix 56
AG2
A
1169 1181Right-handed alpha
Helix 57
AG3
A
1191 1197Right-handed alpha
Helix 58
AG4
A
1200 1215Right-handed alpha
Helix 59
AG5
A
1253 1275Right-handed alpha
Helix 60
AG6
A
1287 1298Right-handed alpha
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There are 7 sheets in PDB entry 6I1K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 598first strand
Strand 2
A
829 833anti-parallel
Strand 3
A
877 886anti-parallel
Strand 4
A
13 23anti-parallel
Strand 5
A
783 789anti-parallel
Strand 6
A
627 633anti-parallel
Strand 7
A
619 624anti-parallel
Strand 8
A
654 661anti-parallel
Strand 9
A
762 769anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 598first strand
Strand 2
A
829 833anti-parallel
Strand 3
A
877 886anti-parallel
Strand 4
A
822 824anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
252 253anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 394first strand
Strand 2
A
450 452anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
935 940first strand
Strand 2
A
925 929anti-parallel
Strand 3
A
912 917anti-parallel
Strand 4
A
1001 1006parallel
Strand 5
A
1074 1077parallel
Strand 6
A
1070 1071anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
943 945first strand
Strand 2
A
950 952anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1118first strand
Strand 2
A
1123 1129anti-parallel
Strand 3
A
1141 1145anti-parallel
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