Analysis of interatomic Contacts of Structural Units in PDB entry:
6I1L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I1L entry

There is 1 chain in PDB entry 6I1L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 0	TYR 1228

There are115 helices in PDB entry 6I1L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	7	Right-handed 310
Helix 2	AA2	A	26	35	Right-handed alpha
Helix 3	AA3	A	35	69	Right-handed alpha
Helix 4	AA4	A	72	86	Right-handed alpha
Helix 5	AA5	A	91	116	Right-handed alpha
Helix 6	AA6	A	117	122	Right-handed 310
Helix 7	AA7	A	124	128	Right-handed 310
Helix 8	AA8	A	136	148	Right-handed alpha
Helix 9	AA9	A	161	172	Right-handed alpha
Helix 10	AB1	A	175	178	Right-handed 310
Helix 11	AB2	A	179	191	Right-handed alpha
Helix 12	AB3	A	198	205	Right-handed alpha
Helix 13	AB4	A	206	225	Right-handed alpha
Helix 14	AB5	A	230	238	Right-handed alpha
Helix 15	AB6	A	238	242	Right-handed alpha
Helix 16	AB7	A	259	264	Right-handed alpha
Helix 17	AB8	A	265	273	Right-handed 310
Helix 18	AB9	A	274	287	Right-handed alpha
Helix 19	AC1	A	299	312	Right-handed alpha
Helix 20	AC2	A	313	320	Right-handed 310
Helix 21	AC3	A	344	362	Right-handed alpha
Helix 22	AC4	A	369	383	Right-handed alpha
Helix 23	AC5	A	396	408	Right-handed alpha
Helix 24	AC6	A	411	426	Right-handed alpha
Helix 25	AC7	A	434	445	Right-handed alpha
Helix 26	AC8	A	453	466	Right-handed alpha
Helix 27	AC9	A	474	484	Right-handed alpha
Helix 28	AD1	A	485	507	Right-handed alpha
Helix 29	AD2	A	512	518	Right-handed 310
Helix 30	AD3	A	519	542	Right-handed alpha
Helix 31	AD4	A	558	573	Right-handed alpha
Helix 32	AD5	A	574	587	Right-handed alpha
Helix 33	AD6	A	610	612	Right-handed 310
Helix 34	AD7	A	613	618	Right-handed alpha
Helix 35	AD8	A	635	638	Right-handed 310
Helix 36	AD9	A	642	649	Right-handed alpha
Helix 37	AE1	A	664	674	Right-handed alpha
Helix 38	AE2	A	685	694	Right-handed alpha
Helix 39	AE3	A	703	707	Right-handed 310
Helix 40	AE4	A	713	731	Right-handed alpha
Helix 41	AE5	A	733	738	Right-handed 310
Helix 42	AE6	A	743	747	Right-handed 310
Helix 43	AE7	A	749	761	Right-handed alpha
Helix 44	AE8	A	770	780	Right-handed alpha
Helix 45	AE9	A	790	794	Right-handed 310
Helix 46	AF1	A	802	812	Right-handed alpha
Helix 47	AF2	A	813	818	Right-handed alpha
Helix 48	AF3	A	870	874	Right-handed 310
Helix 49	AF4	A	895	907	Right-handed alpha
Helix 50	AF5	A	908	911	Right-handed 310
Helix 51	AF6	A	952	971	Right-handed alpha
Helix 52	AF7	A	977	999	Right-handed alpha
Helix 53	AF8	A	1023	1036	Right-handed alpha
Helix 54	AF9	A	1101	1110	Right-handed alpha
Helix 55	AG1	A	1131	1133	Right-handed 310
Helix 56	AG2	A	1169	1181	Right-handed alpha
Helix 57	AG3	A	1191	1198	Right-handed alpha
Helix 58	AG4	A	1200	1216	Right-handed alpha
Helix 59	AG5	A	1242	1246	Right-handed 310
Helix 60	AG6	A	1253	1275	Right-handed alpha
Helix 61	AG7	A	1287	1298	Right-handed alpha
Helix 62	AG8	D	2	7	Right-handed 310
Helix 63	AG9	D	26	35	Right-handed alpha
Helix 64	AH1	D	35	69	Right-handed alpha
Helix 65	AH2	D	72	89	Right-handed alpha
Helix 66	AH3	D	94	115	Right-handed alpha
Helix 67	AH4	D	136	148	Right-handed alpha
Helix 68	AH5	D	161	172	Right-handed alpha
Helix 69	AH6	D	175	178	Right-handed 310
Helix 70	AH7	D	179	188	Right-handed alpha
Helix 71	AH8	D	198	205	Right-handed alpha
Helix 72	AH9	D	206	225	Right-handed alpha
Helix 73	AI1	D	230	238	Right-handed alpha
Helix 74	AI2	D	238	242	Right-handed alpha
Helix 75	AI3	D	259	264	Right-handed alpha
Helix 76	AI4	D	265	273	Right-handed 310
Helix 77	AI5	D	274	287	Right-handed alpha
Helix 78	AI6	D	299	312	Right-handed alpha
Helix 79	AI7	D	313	320	Right-handed 310
Helix 80	AI8	D	344	362	Right-handed alpha
Helix 81	AI9	D	369	383	Right-handed alpha
Helix 82	AJ1	D	387	390	Right-handed 310
Helix 83	AJ2	D	396	408	Right-handed alpha
Helix 84	AJ3	D	411	426	Right-handed alpha
Helix 85	AJ4	D	453	466	Right-handed alpha
Helix 86	AJ5	D	474	484	Right-handed alpha
Helix 87	AJ6	D	486	506	Right-handed alpha
Helix 88	AJ7	D	512	516	Right-handed 310
Helix 89	AJ8	D	519	542	Right-handed alpha
Helix 90	AJ9	D	558	573	Right-handed alpha
Helix 91	AK1	D	574	587	Right-handed alpha
Helix 92	AK2	D	613	618	Right-handed alpha
Helix 93	AK3	D	642	649	Right-handed alpha
Helix 94	AK4	D	664	673	Right-handed alpha
Helix 95	AK5	D	678	683	Right-handed alpha
Helix 96	AK6	D	685	695	Right-handed alpha
Helix 97	AK7	D	713	731	Right-handed alpha
Helix 98	AK8	D	733	738	Right-handed 310
Helix 99	AK9	D	743	747	Right-handed 310
Helix 100	AL1	D	749	761	Right-handed alpha
Helix 101	AL2	D	770	780	Right-handed alpha
Helix 102	AL3	D	790	794	Right-handed 310
Helix 103	AL4	D	802	813	Right-handed alpha
Helix 104	AL5	D	813	819	Right-handed alpha
Helix 105	AL6	D	870	874	Right-handed 310
Helix 106	AL7	D	895	907	Right-handed alpha
Helix 107	AL8	D	953	969	Right-handed alpha
Helix 108	AL9	D	976	1000	Right-handed alpha
Helix 109	AM1	D	1019	1036	Right-handed alpha
Helix 110	AM2	D	1101	1110	Right-handed alpha
Helix 111	AM3	D	1169	1181	Right-handed alpha
Helix 112	AM4	D	1191	1198	Right-handed alpha
Helix 113	AM5	D	1200	1216	Right-handed alpha
Helix 114	AM6	D	1253	1275	Right-handed alpha
Helix 115	AM7	D	1287	1299	Right-handed alpha

There are 18 sheets in PDB entry 6I1L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	596	598	first strand
Strand 2	A	829	833	anti-parallel
Strand 3	A	877	886	anti-parallel
Strand 4	A	13	23	anti-parallel
Strand 5	A	783	789	anti-parallel
Strand 6	A	627	633	anti-parallel
Strand 7	A	619	624	anti-parallel
Strand 8	A	654	661	anti-parallel
Strand 9	A	762	769	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	596	598	first strand
Strand 2	A	829	833	anti-parallel
Strand 3	A	877	886	anti-parallel
Strand 4	A	822	824	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	247	first strand
Strand 2	A	252	257	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	392	394	first strand
Strand 2	A	450	452	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	849	850	first strand
Strand 2	A	860	861	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	935	940	first strand
Strand 2	A	925	929	anti-parallel
Strand 3	A	912	917	anti-parallel
Strand 4	A	1001	1006	parallel
Strand 5	A	1074	1077	parallel
Strand 6	A	1070	1071	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1114	1118	first strand
Strand 2	A	1123	1129	anti-parallel
Strand 3	A	1141	1145	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1150	1154	first strand
Strand 2	A	1164	1168	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1218	1220	first strand
Strand 2	A	1227	1229	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	596	598	first strand
Strand 2	D	829	833	anti-parallel
Strand 3	D	877	886	anti-parallel
Strand 4	D	13	23	anti-parallel
Strand 5	D	783	789	anti-parallel
Strand 6	D	627	633	anti-parallel
Strand 7	D	619	624	anti-parallel
Strand 8	D	654	661	anti-parallel
Strand 9	D	762	769	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	596	598	first strand
Strand 2	D	829	833	anti-parallel
Strand 3	D	877	886	anti-parallel
Strand 4	D	822	824	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	243	247	first strand
Strand 2	D	252	257	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	392	394	first strand
Strand 2	D	450	452	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	849	850	first strand
Strand 2	D	860	861	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	935	940	first strand
Strand 2	D	925	929	anti-parallel
Strand 3	D	912	917	anti-parallel
Strand 4	D	1001	1006	parallel
Strand 5	D	1074	1077	parallel
Strand 6	D	1070	1071	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1114	1118	first strand
Strand 2	D	1123	1129	anti-parallel
Strand 3	D	1141	1145	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1150	1151	first strand
Strand 2	D	1167	1168	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1218	1219	first strand
Strand 2	D	1228	1229	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I1L

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I1L