Analysis of interatomic Contacts of Structural Units in PDB entry:
6I2I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I2I entry

There are 2 chains in PDB entry 6I2I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 439
B
 MET 1GLN 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6I2I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 29Right-handed alpha
Helix 2
AA2
A
72 81Right-handed alpha
Helix 3
AA3
A
82 85Right-handed 310
Helix 4
AA4
A
102 107Right-handed alpha
Helix 5
AA5
A
110 127Right-handed alpha
Helix 6
AA6
A
144 149Right-handed alpha
Helix 7
AA7
A
149 161Right-handed alpha
Helix 8
AA8
A
182 190Right-handed alpha
Helix 9
AA9
A
191 194Right-handed 310
Helix 10
AB1
A
206 211Right-handed alpha
Helix 11
AB2
A
211 216Right-handed alpha
Helix 12
AB3
A
223 228Right-handed alpha
Helix 13
AB4
A
228 239Right-handed alpha
Helix 14
AB5
A
239 244Right-handed alpha
Helix 15
AB6
A
253 260Right-handed alpha
Helix 16
AB7
A
287 292Right-handed alpha
Helix 17
AB8
A
293 297Right-handed 310
Helix 18
AB9
A
324 338Right-handed alpha
Helix 19
AC1
A
383 387Right-handed 310
Helix 20
AC2
A
388 397Right-handed alpha
Helix 21
AC3
A
404 408Right-handed 310
Helix 22
AC4
A
415 437Right-handed alpha
Helix 23
AC5
B
12 29Right-handed alpha
Helix 24
AC6
B
40 47Right-handed alpha
Helix 25
AC7
B
48 51Right-handed 310
Helix 26
AC8
B
71 81Right-handed alpha
Helix 27
AC9
B
110 113Right-handed 310
Helix 28
AD1
B
114 126Right-handed alpha
Helix 29
AD2
B
143 148Right-handed alpha
Helix 30
AD3
B
151 161Right-handed alpha
Helix 31
AD4
B
184 196Right-handed alpha
Helix 32
AD5
B
207 215Right-handed alpha
Helix 33
AD6
B
223 239Right-handed alpha
Helix 34
AD7
B
251 259Right-handed alpha
Helix 35
AD8
B
287 296Right-handed alpha
Helix 36
AD9
B
306 310Right-handed 310
Helix 37
AE1
B
324 339Right-handed alpha
Helix 38
AE2
B
340 343Right-handed 310
Helix 39
AE3
B
384 401Right-handed alpha
Helix 40
AE4
B
405 410Right-handed alpha
Helix 41
AE5
B
415 433Right-handed alpha
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There are 8 sheets in PDB entry 6I2I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
3 9parallel
Strand 3
A
132 140parallel
Strand 4
A
165 172parallel
Strand 5
A
200 201parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
3 9parallel
Strand 3
A
132 140parallel
Strand 4
A
165 172parallel
Strand 5
A
204 205parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
61 63anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 270first strand
Strand 2
A
378 381anti-parallel
Strand 3
A
312 314anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 354first strand
Strand 2
A
317 321parallel
Strand 3
A
373 375anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 68first strand
Strand 2
B
3 9parallel
Strand 3
B
132 139parallel
Strand 4
B
165 172parallel
Strand 5
B
200 205parallel
Strand 6
B
267 268parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
60 63anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
353 356first strand
Strand 2
B
312 320parallel
Strand 3
B
377 381anti-parallel
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