Analysis of interatomic Contacts of Structural Units in PDB entry:
6I2M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I2M entry

There are 2 chains in PDB entry 6I2M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 196
B
 THR 24ASN 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6I2M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 18Right-handed alpha
Helix 2
AA2
A
35 43Right-handed alpha
Helix 3
AA3
A
43 50Right-handed alpha
Helix 4
AA4
A
68 80Right-handed alpha
Helix 5
AA5
A
90 102Right-handed alpha
Helix 6
AA6
A
103 117Right-handed alpha
Helix 7
AA7
A
119 133Right-handed alpha
Helix 8
AA8
A
135 148Right-handed alpha
Helix 9
AA9
A
149 154Right-handed alpha
Helix 10
AB1
A
156 162Right-handed 310
Helix 11
AB2
A
163 172Right-handed alpha
Helix 12
AB3
A
183 196Right-handed alpha
Helix 13
AB4
B
25 46Right-handed alpha
Helix 14
AB5
B
48 52Right-handed 310
Helix 15
AB6
B
53 67Right-handed alpha
Helix 16
AB7
B
69 88Right-handed alpha
Helix 17
AB8
B
88 95Right-handed alpha
Helix 18
AB9
B
100 123Right-handed alpha
Helix 19
AC1
B
123 129Right-handed alpha
Helix 20
AC2
B
129 134Right-handed alpha
Helix 21
AC3
B
138 151Right-handed alpha
Helix 22
AC4
B
154 175Right-handed alpha
Helix 23
AC5
B
179 193Right-handed alpha
Helix 24
AC6
B
198 205Right-handed alpha
Helix 25
AC7
B
205 228Right-handed alpha
Helix 26
AC8
B
229 252Right-handed alpha
Helix 27
AC9
B
253 255Right-handed 310
Helix 28
AD1
B
256 269Right-handed alpha
Helix 29
AD2
B
272 278Right-handed alpha
Helix 30
AD3
B
283 291Right-handed alpha
Helix 31
AD4
B
292 304Right-handed alpha
Helix 32
AD5
B
308 328Right-handed alpha
Helix 33
AD6
B
345 359Right-handed alpha
Helix 34
AD7
B
363 381Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6I2M.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
23 27anti-parallel
Strand 3
A
61 63parallel
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