Analysis of interatomic Contacts of Structural Units in PDB entry:
6I2Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I2Y entry

There are 2 chains in PDB entry 6I2Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 24GLU 317
B
 GLU 24GLU 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6I2Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 35Right-handed alpha
Helix 2
AA2
A
71 88Right-handed alpha
Helix 3
AA3
A
117 126Right-handed alpha
Helix 4
AA4
A
130 151Right-handed alpha
Helix 5
AA5
A
159 161Right-handed 310
Helix 6
AA6
A
200 207Right-handed alpha
Helix 7
AA7
A
216 233Right-handed alpha
Helix 8
AA8
A
241 252Right-handed alpha
Helix 9
AA9
A
264 275Right-handed alpha
Helix 10
AB1
A
284 290Right-handed alpha
Helix 11
AB2
A
291 296Right-handed alpha
Helix 12
AB3
A
300 315Right-handed alpha
Helix 13
AB4
B
31 34Right-handed 310
Helix 14
AB5
B
73 88Right-handed alpha
Helix 15
AB6
B
118 126Right-handed alpha
Helix 16
AB7
B
130 151Right-handed alpha
Helix 17
AB8
B
159 161Right-handed 310
Helix 18
AB9
B
200 207Right-handed alpha
Helix 19
AC1
B
216 233Right-handed alpha
Helix 20
AC2
B
241 252Right-handed alpha
Helix 21
AC3
B
264 275Right-handed alpha
Helix 22
AC4
B
284 290Right-handed alpha
Helix 23
AC5
B
291 296Right-handed alpha
Helix 24
AC6
B
300 315Right-handed alpha
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There are 5 sheets in PDB entry 6I2Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 44first strand
Strand 2
A
49 55anti-parallel
Strand 3
A
62 67anti-parallel
Strand 4
A
105 111anti-parallel
Strand 5
A
96 102anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 154first strand
Strand 2
A
180 181anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 165first strand
Strand 2
A
171 173anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 44first strand
Strand 2
B
49 55anti-parallel
Strand 3
B
61 66anti-parallel
Strand 4
B
107 111anti-parallel
Strand 5
B
96 100anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 117first strand
Strand 2
B
163 165anti-parallel
Strand 3
B
171 173anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il