Analysis of interatomic Contacts of Structural Units in PDB entry:
6I33

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I33 entry

There are 2 chains in PDB entry 6I33 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 49	MET 1005
B	ARG 51	ILE 381

There are 99 helices in PDB entry 6I33. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	57	Right-handed alpha
Helix 2	AA2	A	63	68	Right-handed alpha
Helix 3	AA3	A	71	83	Right-handed alpha
Helix 4	AA4	A	86	95	Right-handed alpha
Helix 5	AA5	A	96	100	Right-handed 310
Helix 6	AA6	A	112	114	Right-handed 310
Helix 7	AA7	A	115	125	Right-handed alpha
Helix 8	AA8	A	144	151	Right-handed alpha
Helix 9	AA9	A	154	159	Right-handed alpha
Helix 10	AB1	A	165	168	Right-handed 310
Helix 11	AB2	A	169	188	Right-handed alpha
Helix 12	AB3	A	198	215	Right-handed alpha
Helix 13	AB4	A	226	241	Right-handed alpha
Helix 14	AB5	A	248	252	Right-handed 310
Helix 15	AB6	A	276	286	Right-handed alpha
Helix 16	AB7	A	297	301	Right-handed 310
Helix 17	AB8	A	304	309	Right-handed 310
Helix 18	AB9	A	324	328	Right-handed 310
Helix 19	AC1	A	338	344	Right-handed 310
Helix 20	AC2	A	365	368	Right-handed 310
Helix 21	AC3	A	369	374	Right-handed alpha
Helix 22	AC4	A	375	377	Right-handed 310
Helix 23	AC5	A	385	425	Right-handed alpha
Helix 24	AC6	A	445	456	Right-handed alpha
Helix 25	AC7	A	477	488	Right-handed alpha
Helix 26	AC8	A	493	500	Right-handed alpha
Helix 27	AC9	A	522	526	Right-handed 310
Helix 28	AD1	A	530	544	Right-handed alpha
Helix 29	AD2	A	564	569	Right-handed alpha
Helix 30	AD3	A	570	572	Right-handed 310
Helix 31	AD4	A	573	578	Right-handed alpha
Helix 32	AD5	A	584	587	Right-handed 310
Helix 33	AD6	A	588	607	Right-handed alpha
Helix 34	AD7	A	617	636	Right-handed alpha
Helix 35	AD8	A	652	661	Right-handed alpha
Helix 36	AD9	A	677	689	Right-handed alpha
Helix 37	AE1	A	709	720	Right-handed alpha
Helix 38	AE2	A	730	734	Right-handed 310
Helix 39	AE3	A	739	744	Right-handed 310
Helix 40	AE4	A	774	780	Right-handed 310
Helix 41	AE5	A	807	809	Right-handed 310
Helix 42	AE6	A	810	845	Right-handed alpha
Helix 43	AE7	A	868	875	Right-handed alpha
Helix 44	AE8	A	877	888	Right-handed alpha
Helix 45	AE9	A	912	935	Right-handed alpha
Helix 46	AF1	A	943	948	Right-handed alpha
Helix 47	AF2	A	951	956	Right-handed alpha
Helix 48	AF3	A	965	971	Right-handed alpha
Helix 49	AF4	A	977	981	Right-handed 310
Helix 50	AF5	A	990	997	Right-handed alpha
Helix 51	AF6	B	52	57	Right-handed alpha
Helix 52	AF7	B	63	68	Right-handed alpha
Helix 53	AF8	B	71	83	Right-handed alpha
Helix 54	AF9	B	86	95	Right-handed alpha
Helix 55	AG1	B	96	100	Right-handed 310
Helix 56	AG2	B	112	114	Right-handed 310
Helix 57	AG3	B	115	125	Right-handed alpha
Helix 58	AG4	B	144	151	Right-handed alpha
Helix 59	AG5	B	154	159	Right-handed alpha
Helix 60	AG6	B	165	168	Right-handed 310
Helix 61	AG7	B	169	188	Right-handed alpha
Helix 62	AG8	B	198	215	Right-handed alpha
Helix 63	AG9	B	226	241	Right-handed alpha
Helix 64	AH1	B	248	252	Right-handed 310
Helix 65	AH2	B	276	286	Right-handed alpha
Helix 66	AH3	B	297	301	Right-handed 310
Helix 67	AH4	B	304	309	Right-handed 310
Helix 68	AH5	B	324	328	Right-handed 310
Helix 69	AH6	B	338	344	Right-handed 310
Helix 70	AH7	B	365	368	Right-handed 310
Helix 71	AH8	B	369	374	Right-handed alpha
Helix 72	AH9	B	375	377	Right-handed 310
Helix 73	AI1	B	385	425	Right-handed alpha
Helix 74	AI2	B	445	456	Right-handed alpha
Helix 75	AI3	B	477	488	Right-handed alpha
Helix 76	AI4	B	493	500	Right-handed alpha
Helix 77	AI5	B	522	527	Right-handed 310
Helix 78	AI6	B	530	544	Right-handed alpha
Helix 79	AI7	B	564	569	Right-handed alpha
Helix 80	AI8	B	570	572	Right-handed 310
Helix 81	AI9	B	573	578	Right-handed alpha
Helix 82	AJ1	B	584	587	Right-handed 310
Helix 83	AJ2	B	588	607	Right-handed alpha
Helix 84	AJ3	B	617	633	Right-handed alpha
Helix 85	AJ4	B	652	661	Right-handed alpha
Helix 86	AJ5	B	709	720	Right-handed alpha
Helix 87	AJ6	B	728	734	Right-handed 310
Helix 88	AJ7	B	739	744	Right-handed 310
Helix 89	AJ8	B	774	780	Right-handed 310
Helix 90	AJ9	B	807	809	Right-handed 310
Helix 91	AK1	B	810	845	Right-handed alpha
Helix 92	AK2	B	868	875	Right-handed alpha
Helix 93	AK3	B	877	888	Right-handed alpha
Helix 94	AK4	B	912	935	Right-handed alpha
Helix 95	AK5	B	943	948	Right-handed alpha
Helix 96	AK6	B	951	956	Right-handed alpha
Helix 97	AK7	B	965	971	Right-handed alpha
Helix 98	AK8	B	977	981	Right-handed 310
Helix 99	AK9	B	990	997	Right-handed alpha

There are 14 sheets in PDB entry 6I33. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	132	first strand
Strand 2	A	458	459	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	191	192	first strand
Strand 2	A	332	336	anti-parallel
Strand 3	A	312	316	anti-parallel
Strand 4	A	289	294	parallel
Strand 5	A	259	266	parallel
Strand 6	A	218	221	parallel
Strand 7	A	243	246	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	353	first strand
Strand 2	A	359	363	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	428	429	first strand
Strand 2	A	437	441	anti-parallel
Strand 3	A	468	471	anti-parallel
Strand 4	A	461	462	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	610	612	first strand
Strand 2	A	770	772	anti-parallel
Strand 3	A	747	749	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	664	668	first strand
Strand 2	A	643	647	parallel
Strand 3	A	692	698	parallel
Strand 4	A	723	727	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	849	850	first strand
Strand 2	A	863	866	anti-parallel
Strand 3	A	903	905	anti-parallel
Strand 4	A	894	895	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	132	first strand
Strand 2	B	458	459	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	191	192	first strand
Strand 2	B	332	336	anti-parallel
Strand 3	B	312	316	anti-parallel
Strand 4	B	289	294	parallel
Strand 5	B	259	266	parallel
Strand 6	B	218	221	parallel
Strand 7	B	243	246	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	353	first strand
Strand 2	B	359	363	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	428	429	first strand
Strand 2	B	437	441	anti-parallel
Strand 3	B	468	471	anti-parallel
Strand 4	B	461	462	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	610	612	first strand
Strand 2	B	770	772	anti-parallel
Strand 3	B	747	749	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	664	668	first strand
Strand 2	B	643	647	parallel
Strand 3	B	694	698	parallel
Strand 4	B	724	727	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	849	850	first strand
Strand 2	B	863	866	anti-parallel
Strand 3	B	903	905	anti-parallel
Strand 4	B	894	895	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I33

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I33