Analysis of interatomic Contacts of Structural Units in PDB entry:
6I35

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I35 entry

There are 2 chains in PDB entry 6I35 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 49	MET 1005
B	ARG 51	LYS 376

There are204 helices in PDB entry 6I35. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	57	Right-handed alpha
Helix 2	AA2	A	63	68	Right-handed alpha
Helix 3	AA3	A	71	82	Right-handed alpha
Helix 4	AA4	A	86	95	Right-handed alpha
Helix 5	AA5	A	96	100	Right-handed 310
Helix 6	AA6	A	112	125	Right-handed alpha
Helix 7	AA7	A	144	151	Right-handed alpha
Helix 8	AA8	A	154	159	Right-handed alpha
Helix 9	AA9	A	165	168	Right-handed 310
Helix 10	AB1	A	169	188	Right-handed alpha
Helix 11	AB2	A	198	215	Right-handed alpha
Helix 12	AB3	A	226	241	Right-handed alpha
Helix 13	AB4	A	248	252	Right-handed 310
Helix 14	AB5	A	276	286	Right-handed alpha
Helix 15	AB6	A	297	301	Right-handed 310
Helix 16	AB7	A	304	309	Right-handed 310
Helix 17	AB8	A	324	328	Right-handed 310
Helix 18	AB9	A	338	344	Right-handed 310
Helix 19	AC1	A	365	368	Right-handed 310
Helix 20	AC2	A	369	374	Right-handed alpha
Helix 21	AC3	A	375	377	Right-handed 310
Helix 22	AC4	A	385	425	Right-handed alpha
Helix 23	AC5	A	445	456	Right-handed alpha
Helix 24	AC6	A	477	488	Right-handed alpha
Helix 25	AC7	A	493	501	Right-handed alpha
Helix 26	AC8	A	507	511	Right-handed 310
Helix 27	AC9	A	522	527	Right-handed 310
Helix 28	AD1	A	530	544	Right-handed alpha
Helix 29	AD2	A	564	569	Right-handed alpha
Helix 30	AD3	A	570	572	Right-handed 310
Helix 31	AD4	A	573	578	Right-handed alpha
Helix 32	AD5	A	584	587	Right-handed 310
Helix 33	AD6	A	588	607	Right-handed alpha
Helix 34	AD7	A	617	636	Right-handed alpha
Helix 35	AD8	A	652	661	Right-handed alpha
Helix 36	AD9	A	677	689	Right-handed alpha
Helix 37	AE1	A	709	719	Right-handed alpha
Helix 38	AE2	A	728	734	Right-handed 310
Helix 39	AE3	A	739	743	Right-handed 310
Helix 40	AE4	A	751	756	Right-handed alpha
Helix 41	AE5	A	774	780	Right-handed 310
Helix 42	AE6	A	807	809	Right-handed 310
Helix 43	AE7	A	810	845	Right-handed alpha
Helix 44	AE8	A	868	875	Right-handed alpha
Helix 45	AE9	A	877	888	Right-handed alpha
Helix 46	AF1	A	912	935	Right-handed alpha
Helix 47	AF2	A	943	948	Right-handed alpha
Helix 48	AF3	A	951	957	Right-handed alpha
Helix 49	AF4	A	965	971	Right-handed alpha
Helix 50	AF5	A	977	981	Right-handed 310
Helix 51	AF6	A	990	997	Right-handed alpha
Helix 52	AF7	B	52	57	Right-handed alpha
Helix 53	AF8	B	63	68	Right-handed alpha
Helix 54	AF9	B	71	82	Right-handed alpha
Helix 55	AG1	B	86	95	Right-handed alpha
Helix 56	AG2	B	96	100	Right-handed 310
Helix 57	AG3	B	112	125	Right-handed alpha
Helix 58	AG4	B	144	151	Right-handed alpha
Helix 59	AG5	B	154	159	Right-handed alpha
Helix 60	AG6	B	165	168	Right-handed 310
Helix 61	AG7	B	169	188	Right-handed alpha
Helix 62	AG8	B	198	215	Right-handed alpha
Helix 63	AG9	B	226	241	Right-handed alpha
Helix 64	AH1	B	248	252	Right-handed 310
Helix 65	AH2	B	276	286	Right-handed alpha
Helix 66	AH3	B	297	301	Right-handed 310
Helix 67	AH4	B	304	309	Right-handed 310
Helix 68	AH5	B	324	328	Right-handed 310
Helix 69	AH6	B	338	344	Right-handed 310
Helix 70	AH7	B	365	368	Right-handed 310
Helix 71	AH8	B	369	374	Right-handed alpha
Helix 72	AH9	B	375	377	Right-handed 310
Helix 73	AI1	B	385	425	Right-handed alpha
Helix 74	AI2	B	445	456	Right-handed alpha
Helix 75	AI3	B	477	488	Right-handed alpha
Helix 76	AI4	B	493	502	Right-handed alpha
Helix 77	AI5	B	507	511	Right-handed 310
Helix 78	AI6	B	522	526	Right-handed 310
Helix 79	AI7	B	530	544	Right-handed alpha
Helix 80	AI8	B	564	569	Right-handed alpha
Helix 81	AI9	B	570	572	Right-handed 310
Helix 82	AJ1	B	573	578	Right-handed alpha
Helix 83	AJ2	B	584	587	Right-handed 310
Helix 84	AJ3	B	588	607	Right-handed alpha
Helix 85	AJ4	B	617	636	Right-handed alpha
Helix 86	AJ5	B	652	661	Right-handed alpha
Helix 87	AJ6	B	677	689	Right-handed alpha
Helix 88	AJ7	B	709	720	Right-handed alpha
Helix 89	AJ8	B	728	734	Right-handed 310
Helix 90	AJ9	B	739	743	Right-handed 310
Helix 91	AK1	B	751	756	Right-handed alpha
Helix 92	AK2	B	774	780	Right-handed 310
Helix 93	AK3	B	807	809	Right-handed 310
Helix 94	AK4	B	810	845	Right-handed alpha
Helix 95	AK5	B	868	875	Right-handed alpha
Helix 96	AK6	B	877	888	Right-handed alpha
Helix 97	AK7	B	912	935	Right-handed alpha
Helix 98	AK8	B	943	948	Right-handed alpha
Helix 99	AK9	B	951	957	Right-handed alpha
Helix 100	AL1	B	965	971	Right-handed alpha
Helix 101	AL2	B	977	981	Right-handed 310
Helix 102	AL3	B	990	997	Right-handed alpha
Helix 103	AL4	C	51	57	Right-handed alpha
Helix 104	AL5	C	63	68	Right-handed alpha
Helix 105	AL6	C	71	82	Right-handed alpha
Helix 106	AL7	C	86	95	Right-handed alpha
Helix 107	AL8	C	96	100	Right-handed 310
Helix 108	AL9	C	112	125	Right-handed alpha
Helix 109	AM1	C	144	151	Right-handed alpha
Helix 110	AM2	C	154	159	Right-handed alpha
Helix 111	AM3	C	165	168	Right-handed 310
Helix 112	AM4	C	169	188	Right-handed alpha
Helix 113	AM5	C	198	215	Right-handed alpha
Helix 114	AM6	C	226	241	Right-handed alpha
Helix 115	AM7	C	248	252	Right-handed 310
Helix 116	AM8	C	276	286	Right-handed alpha
Helix 117	AM9	C	297	301	Right-handed 310
Helix 118	AN1	C	304	309	Right-handed 310
Helix 119	AN2	C	324	328	Right-handed 310
Helix 120	AN3	C	338	344	Right-handed 310
Helix 121	AN4	C	365	368	Right-handed 310
Helix 122	AN5	C	369	374	Right-handed alpha
Helix 123	AN6	C	375	377	Right-handed 310
Helix 124	AN7	C	385	425	Right-handed alpha
Helix 125	AN8	C	445	456	Right-handed alpha
Helix 126	AN9	C	477	488	Right-handed alpha
Helix 127	AO1	C	493	501	Right-handed alpha
Helix 128	AO2	C	507	511	Right-handed 310
Helix 129	AO3	C	522	527	Right-handed 310
Helix 130	AO4	C	530	544	Right-handed alpha
Helix 131	AO5	C	564	569	Right-handed alpha
Helix 132	AO6	C	570	572	Right-handed 310
Helix 133	AO7	C	573	578	Right-handed alpha
Helix 134	AO8	C	584	587	Right-handed 310
Helix 135	AO9	C	588	607	Right-handed alpha
Helix 136	AP1	C	617	636	Right-handed alpha
Helix 137	AP2	C	652	661	Right-handed alpha
Helix 138	AP3	C	677	689	Right-handed alpha
Helix 139	AP4	C	709	720	Right-handed alpha
Helix 140	AP5	C	728	734	Right-handed 310
Helix 141	AP6	C	739	743	Right-handed 310
Helix 142	AP7	C	751	756	Right-handed alpha
Helix 143	AP8	C	774	780	Right-handed 310
Helix 144	AP9	C	807	809	Right-handed 310
Helix 145	AQ1	C	810	845	Right-handed alpha
Helix 146	AQ2	C	868	875	Right-handed alpha
Helix 147	AQ3	C	877	888	Right-handed alpha
Helix 148	AQ4	C	912	935	Right-handed alpha
Helix 149	AQ5	C	943	948	Right-handed alpha
Helix 150	AQ6	C	951	957	Right-handed alpha
Helix 151	AQ7	C	965	971	Right-handed alpha
Helix 152	AQ8	C	977	981	Right-handed 310
Helix 153	AQ9	C	990	997	Right-handed alpha
Helix 154	AR1	D	52	57	Right-handed alpha
Helix 155	AR2	D	63	68	Right-handed alpha
Helix 156	AR3	D	71	82	Right-handed alpha
Helix 157	AR4	D	86	95	Right-handed alpha
Helix 158	AR5	D	96	100	Right-handed 310
Helix 159	AR6	D	112	125	Right-handed alpha
Helix 160	AR7	D	144	151	Right-handed alpha
Helix 161	AR8	D	154	159	Right-handed alpha
Helix 162	AR9	D	165	168	Right-handed 310
Helix 163	AS1	D	169	188	Right-handed alpha
Helix 164	AS2	D	198	215	Right-handed alpha
Helix 165	AS3	D	226	241	Right-handed alpha
Helix 166	AS4	D	248	252	Right-handed 310
Helix 167	AS5	D	276	286	Right-handed alpha
Helix 168	AS6	D	297	301	Right-handed 310
Helix 169	AS7	D	304	308	Right-handed 310
Helix 170	AS8	D	324	328	Right-handed 310
Helix 171	AS9	D	338	344	Right-handed 310
Helix 172	AT1	D	365	368	Right-handed 310
Helix 173	AT2	D	369	374	Right-handed alpha
Helix 174	AT3	D	375	377	Right-handed 310
Helix 175	AT4	D	385	425	Right-handed alpha
Helix 176	AT5	D	445	456	Right-handed alpha
Helix 177	AT6	D	477	488	Right-handed alpha
Helix 178	AT7	D	493	502	Right-handed alpha
Helix 179	AT8	D	507	511	Right-handed 310
Helix 180	AT9	D	522	526	Right-handed 310
Helix 181	AU1	D	530	544	Right-handed alpha
Helix 182	AU2	D	564	569	Right-handed alpha
Helix 183	AU3	D	570	572	Right-handed 310
Helix 184	AU4	D	573	578	Right-handed alpha
Helix 185	AU5	D	584	587	Right-handed 310
Helix 186	AU6	D	588	607	Right-handed alpha
Helix 187	AU7	D	617	636	Right-handed alpha
Helix 188	AU8	D	652	661	Right-handed alpha
Helix 189	AU9	D	677	689	Right-handed alpha
Helix 190	AV1	D	709	719	Right-handed alpha
Helix 191	AV2	D	728	734	Right-handed 310
Helix 192	AV3	D	739	743	Right-handed 310
Helix 193	AV4	D	751	756	Right-handed alpha
Helix 194	AV5	D	774	780	Right-handed 310
Helix 195	AV6	D	807	809	Right-handed 310
Helix 196	AV7	D	810	845	Right-handed alpha
Helix 197	AV8	D	868	875	Right-handed alpha
Helix 198	AV9	D	877	888	Right-handed alpha
Helix 199	AW1	D	912	935	Right-handed alpha
Helix 200	AW2	D	943	948	Right-handed alpha
Helix 201	AW3	D	951	957	Right-handed alpha
Helix 202	AW4	D	965	971	Right-handed alpha
Helix 203	AW5	D	977	981	Right-handed 310
Helix 204	AW6	D	990	997	Right-handed alpha

There are 28 sheets in PDB entry 6I35. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	132	first strand
Strand 2	A	458	459	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	191	192	first strand
Strand 2	A	332	336	anti-parallel
Strand 3	A	312	316	anti-parallel
Strand 4	A	289	294	parallel
Strand 5	A	259	266	parallel
Strand 6	A	218	221	parallel
Strand 7	A	243	246	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	353	first strand
Strand 2	A	359	363	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	428	429	first strand
Strand 2	A	437	441	anti-parallel
Strand 3	A	468	471	anti-parallel
Strand 4	A	461	462	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	610	612	first strand
Strand 2	A	770	772	anti-parallel
Strand 3	A	747	749	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	664	668	first strand
Strand 2	A	643	647	parallel
Strand 3	A	692	698	parallel
Strand 4	A	723	727	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	849	850	first strand
Strand 2	A	863	866	anti-parallel
Strand 3	A	903	905	anti-parallel
Strand 4	A	894	895	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	132	first strand
Strand 2	B	458	459	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	191	192	first strand
Strand 2	B	332	336	anti-parallel
Strand 3	B	312	316	anti-parallel
Strand 4	B	289	294	parallel
Strand 5	B	259	266	parallel
Strand 6	B	218	221	parallel
Strand 7	B	243	246	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	353	first strand
Strand 2	B	359	363	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	428	429	first strand
Strand 2	B	437	441	anti-parallel
Strand 3	B	468	471	anti-parallel
Strand 4	B	461	462	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	610	612	first strand
Strand 2	B	770	772	anti-parallel
Strand 3	B	747	749	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	664	668	first strand
Strand 2	B	643	647	parallel
Strand 3	B	692	698	parallel
Strand 4	B	723	727	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	849	850	first strand
Strand 2	B	863	866	anti-parallel
Strand 3	B	903	905	anti-parallel
Strand 4	B	894	895	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	132	first strand
Strand 2	C	458	459	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	191	192	first strand
Strand 2	C	332	336	anti-parallel
Strand 3	C	312	316	anti-parallel
Strand 4	C	289	295	parallel
Strand 5	C	259	266	parallel
Strand 6	C	218	221	parallel
Strand 7	C	243	246	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	349	353	first strand
Strand 2	C	359	363	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	428	429	first strand
Strand 2	C	437	441	anti-parallel
Strand 3	C	468	471	anti-parallel
Strand 4	C	461	462	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	610	612	first strand
Strand 2	C	770	772	anti-parallel
Strand 3	C	747	749	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	664	668	first strand
Strand 2	C	643	647	parallel
Strand 3	C	692	698	parallel
Strand 4	C	723	727	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	849	850	first strand
Strand 2	C	863	866	anti-parallel
Strand 3	C	902	905	anti-parallel
Strand 4	C	894	895	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	132	first strand
Strand 2	D	458	459	parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	191	192	first strand
Strand 2	D	332	336	anti-parallel
Strand 3	D	312	316	anti-parallel
Strand 4	D	289	294	parallel
Strand 5	D	259	266	parallel
Strand 6	D	218	221	parallel
Strand 7	D	243	246	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	349	353	first strand
Strand 2	D	359	363	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	428	429	first strand
Strand 2	D	437	441	anti-parallel
Strand 3	D	468	471	anti-parallel
Strand 4	D	461	462	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	610	612	first strand
Strand 2	D	770	772	anti-parallel
Strand 3	D	747	749	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	664	668	first strand
Strand 2	D	643	647	parallel
Strand 3	D	692	698	parallel
Strand 4	D	723	727	parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	849	850	first strand
Strand 2	D	863	866	anti-parallel
Strand 3	D	903	905	anti-parallel
Strand 4	D	894	895	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I35

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I35