Analysis of interatomic Contacts of Structural Units in PDB entry:
6I3I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I3I entry

There is 1 chain in PDB entry 6I3I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1SER 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6I3I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 12Right-handed 310
Helix 2
AA2
A
47 60Right-handed alpha
Helix 3
AA3
A
63 87Right-handed alpha
Helix 4
AA4
A
90 94Right-handed 310
Helix 5
AA5
A
102 116Right-handed alpha
Helix 6
AA6
A
118 130Right-handed alpha
Helix 7
AA7
A
143 165Right-handed alpha
Helix 8
AA8
A
188 198Right-handed alpha
Helix 9
AA9
A
210 227Right-handed alpha
Helix 10
AB1
A
316 318Right-handed 310
Helix 11
AB2
A
319 328Right-handed alpha
Helix 12
AB3
A
329 334Right-handed 310
Helix 13
AB4
A
359 363Right-handed alpha
Helix 14
AB5
A
367 374Right-handed alpha
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There are 5 sheets in PDB entry 6I3I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 34first strand
Strand 2
A
186 187anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
352 358anti-parallel
Strand 3
A
388 400anti-parallel
Strand 4
A
243 254parallel
Strand 5
A
170 180anti-parallel
Strand 6
A
200 205parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
438 445anti-parallel
Strand 3
A
427 433anti-parallel
Strand 4
A
307 314anti-parallel
Strand 5
A
296 302anti-parallel
Strand 6
A
279 291anti-parallel
Strand 7
A
258 260anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
438 445anti-parallel
Strand 3
A
427 433anti-parallel
Strand 4
A
307 314anti-parallel
Strand 5
A
296 302anti-parallel
Strand 6
A
279 291anti-parallel
Strand 7
A
340 349anti-parallel
Strand 8
A
419 422parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 267first strand
Strand 2
A
275 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il