Analysis of interatomic Contacts of Structural Units in PDB entry:
6I3Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I3Y entry

There are 4 chains in PDB entry 6I3Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLN 11GLU 183
F
 SER 2GLU 183
A
 ASP 11LYS 84
H
 ASP 12GLY 79
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6I3Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
25 33Right-handed alpha
Helix 2
AA2
C
76 81Right-handed alpha
Helix 3
AA3
C
146 181Right-handed alpha
Helix 4
AA4
F
25 33Right-handed alpha
Helix 5
AA5
F
75 81Right-handed alpha
Helix 6
AA6
F
83 87Right-handed 310
Helix 7
AA7
F
145 181Right-handed alpha
Helix 8
AA8
A
20 40Right-handed alpha
Helix 9
AA9
A
50 68Right-handed alpha
Helix 10
AB1
H
18 20Right-handed 310
Helix 11
AB2
H
21 40Right-handed alpha
Helix 12
AB3
H
50 69Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6I3Y.

There are 15 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 55first strand
Strand 2
C
61 69anti-parallel
Strand 3
C
89 98anti-parallel
Strand 4
C
103 110anti-parallel
Strand 5
C
118 127anti-parallel
Strand 6
C
135 144anti-parallel
Strand 7
C
14 22anti-parallel
Strand 8
F
4 10anti-parallel
Strand 9
F
13 22anti-parallel
Strand 10
F
135 144anti-parallel
Strand 11
F
118 127anti-parallel
Strand 12
F
103 110anti-parallel
Strand 13
F
89 98anti-parallel
Strand 14
F
61 69anti-parallel
Strand 15
F
45 55anti-parallel
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