Analysis of interatomic Contacts of Structural Units in PDB entry:
6I3Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I3Z entry

There are 4 chains in PDB entry 6I3Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 25LEU 353
B
 PRO 361LYS 394
H
 LEU 4ARG 214
L
 ASP 1ARG 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6I3Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 45Right-handed alpha
Helix 2
AA2
A
53 65Right-handed alpha
Helix 3
AA3
A
72 80Right-handed alpha
Helix 4
AA4
A
88 104Right-handed alpha
Helix 5
AA5
A
128 138Right-handed alpha
Helix 6
AA6
A
149 165Right-handed alpha
Helix 7
AA7
A
259 266Right-handed alpha
Helix 8
AA8
A
268 277Right-handed alpha
Helix 9
AA9
A
299 305Right-handed alpha
Helix 10
AB1
H
83 87Right-handed 310
Helix 11
AB2
L
79 83Right-handed 310
Helix 12
AB3
L
122 127Right-handed alpha
Helix 13
AB4
L
185 191Right-handed alpha
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There are 14 sheets in PDB entry 6I3Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
B
382 388anti-parallel
Strand 3
B
370 376anti-parallel
Strand 4
A
248 255anti-parallel
Strand 5
A
237 243anti-parallel
Strand 6
A
215 231anti-parallel
Strand 7
A
204 209anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
B
382 388anti-parallel
Strand 3
B
370 376anti-parallel
Strand 4
A
248 255anti-parallel
Strand 5
A
237 243anti-parallel
Strand 6
A
215 231anti-parallel
Strand 7
A
282 289anti-parallel
Strand 8
B
363 365parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 119first strand
Strand 2
A
183 193anti-parallel
Strand 3
A
344 353anti-parallel
Strand 4
A
333 340anti-parallel
Strand 5
A
291 294anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 119first strand
Strand 2
A
183 193anti-parallel
Strand 3
A
344 353anti-parallel
Strand 4
A
333 340anti-parallel
Strand 5
A
297 298anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
5 7first strand
Strand 2
H
17 23anti-parallel
Strand 3
H
77 82anti-parallel
Strand 4
H
68 72anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
107 111parallel
Strand 3
H
88 95anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
45 51anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
107 111parallel
Strand 3
H
88 95anti-parallel
Strand 4
H
101 103anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
120 124first strand
Strand 2
H
137 145anti-parallel
Strand 3
H
175 182anti-parallel
Strand 4
H
164 165anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
120 124first strand
Strand 2
H
137 145anti-parallel
Strand 3
H
175 182anti-parallel
Strand 4
H
169 170anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
151 154first strand
Strand 2
H
195 200anti-parallel
Strand 3
H
205 210anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 67anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
102 106parallel
Strand 3
L
84 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
44 49anti-parallel
Strand 6
L
53 54anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 119first strand
Strand 2
L
130 140anti-parallel
Strand 3
L
175 184anti-parallel
Strand 4
L
160 165anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
146 150first strand
Strand 2
L
193 199anti-parallel
Strand 3
L
210 213anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il