Analysis of interatomic Contacts of Structural Units in PDB entry:
6I44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I44 entry

There is 1 chain in PDB entry 6I44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1ASP 610
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6I44. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 35Right-handed alpha
Helix 2
AA2
A
45 49Right-handed 310
Helix 3
AA3
A
85 89Right-handed 310
Helix 4
AA4
A
114 124Right-handed alpha
Helix 5
AA5
A
140 144Right-handed 310
Helix 6
AA6
A
152 156Right-handed 310
Helix 7
AA7
A
172 176Right-handed 310
Helix 8
AA8
A
204 215Right-handed alpha
Helix 9
AA9
A
230 234Right-handed 310
Helix 10
AB1
A
295 306Right-handed alpha
Helix 11
AB2
A
317 321Right-handed 310
Helix 12
AB3
A
413 418Right-handed 310
Helix 13
AB4
A
422 424Right-handed 310
Helix 14
AB5
A
434 438Right-handed 310
Helix 15
AB6
A
525 533Right-handed alpha
Helix 16
AB7
A
598 610Right-handed alpha
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There are 7 sheets in PDB entry 6I44. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 12first strand
Strand 2
A
70 80anti-parallel
Strand 3
A
40 44anti-parallel
Strand 4
A
57 61anti-parallel
Strand 5
A
16 21anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 103first strand
Strand 2
A
159 170anti-parallel
Strand 3
A
130 134anti-parallel
Strand 4
A
146 151anti-parallel
Strand 5
A
105 111anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 191first strand
Strand 2
A
251 260anti-parallel
Strand 3
A
220 224anti-parallel
Strand 4
A
236 241anti-parallel
Strand 5
A
195 201anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 279first strand
Strand 2
A
347 351anti-parallel
Strand 3
A
311 315anti-parallel
Strand 4
A
326 332anti-parallel
Strand 5
A
286 293anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 283first strand
Strand 2
A
341 342anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 377first strand
Strand 2
A
517 520anti-parallel
Strand 3
A
498 502anti-parallel
Strand 4
A
562 567anti-parallel
Strand 5
A
570 579anti-parallel
Strand 6
A
590 594anti-parallel
Strand 7
A
542 545anti-parallel
Strand 8
A
523 524anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
426 429first strand
Strand 2
A
386 392anti-parallel
Strand 3
A
396 406anti-parallel
Strand 4
A
409 412anti-parallel
Strand 5
A
466 470anti-parallel
Strand 6
A
447 452anti-parallel
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