Analysis of interatomic Contacts of Structural Units in PDB entry:
6I4X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I4X entry

There are 7 chains in PDB entry 6I4X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1LEU 88
B
 ILE 90MET 103
C
 MET 17CYS 112
A
 SER 30MET 132
A
 LYS 134VAL 198
D
 SER -3GLU -1
D
 THR 1PRO 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 6I4X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
23 36Right-handed alpha
Helix 2
AA2
B
38 40Right-handed 310
Helix 3
AA3
C
33 37Right-handed alpha
Helix 4
AA4
C
39 45Right-handed alpha
Helix 5
AA5
C
66 83Right-handed alpha
Helix 6
AA6
C
96 111Right-handed alpha
Helix 7
AA7
A
31 47Right-handed alpha
Helix 8
AA8
A
54 62Right-handed alpha
Helix 9
AA9
A
121 133Right-handed alpha
Helix 10
AB1
A
162 173Right-handed alpha
Helix 11
AB2
A
184 193Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 6I4X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 50first strand
Strand 2
B
42 46anti-parallel
Strand 3
B
73 81anti-parallel
Strand 4
B
84 85anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 50first strand
Strand 2
B
42 46anti-parallel
Strand 3
B
73 81anti-parallel
Strand 4
B
2 9parallel
Strand 5
B
12 19anti-parallel
Strand 6
C
28 32parallel
Strand 7
C
18 22anti-parallel
Strand 8
C
59 61parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 74first strand
Strand 2
A
82 88anti-parallel
Strand 3
A
91 100anti-parallel
Strand 4
A
103 106anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il