Analysis of interatomic Contacts of Structural Units in PDB entry:
6I5F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I5F entry

There are 2 chains in PDB entry 6I5F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 12	ILE 799
B	ASN 6	SER 516

There are 62 helices in PDB entry 6I5F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	17	Right-handed 310
Helix 2	AA2	A	42	50	Right-handed alpha
Helix 3	AA3	A	76	87	Right-handed alpha
Helix 4	AA4	A	162	174	Right-handed alpha
Helix 5	AA5	A	200	204	Right-handed 310
Helix 6	AA6	A	205	217	Right-handed alpha
Helix 7	AA7	A	230	249	Right-handed alpha
Helix 8	AA8	A	262	266	Right-handed 310
Helix 9	AA9	A	270	277	Right-handed alpha
Helix 10	AB1	A	290	296	Right-handed alpha
Helix 11	AB2	A	300	313	Right-handed alpha
Helix 12	AB3	A	317	332	Right-handed alpha
Helix 13	AB4	A	334	346	Right-handed alpha
Helix 14	AB5	A	347	357	Right-handed alpha
Helix 15	AB6	A	361	373	Right-handed alpha
Helix 16	AB7	A	374	383	Right-handed alpha
Helix 17	AB8	A	387	397	Right-handed alpha
Helix 18	AB9	A	400	411	Right-handed alpha
Helix 19	AC1	A	430	442	Right-handed alpha
Helix 20	AC2	A	444	459	Right-handed alpha
Helix 21	AC3	A	481	485	Right-handed 310
Helix 22	AC4	A	503	536	Right-handed alpha
Helix 23	AC5	A	538	565	Right-handed alpha
Helix 24	AC6	A	587	592	Right-handed alpha
Helix 25	AC7	A	619	635	Right-handed alpha
Helix 26	AC8	A	669	684	Right-handed alpha
Helix 27	AC9	A	700	718	Right-handed alpha
Helix 28	AD1	A	731	733	Right-handed 310
Helix 29	AD2	A	734	739	Right-handed alpha
Helix 30	AD3	A	771	780	Right-handed alpha
Helix 31	AD4	A	782	798	Right-handed alpha
Helix 32	AD5	B	6	10	Right-handed 310
Helix 33	AD6	B	11	21	Right-handed alpha
Helix 34	AD7	B	41	51	Right-handed alpha
Helix 35	AD8	B	75	85	Right-handed alpha
Helix 36	AD9	B	162	174	Right-handed alpha
Helix 37	AE1	B	186	190	Right-handed 310
Helix 38	AE2	B	205	218	Right-handed alpha
Helix 39	AE3	B	222	226	Right-handed 310
Helix 40	AE4	B	230	249	Right-handed alpha
Helix 41	AE5	B	270	277	Right-handed alpha
Helix 42	AE6	B	290	296	Right-handed alpha
Helix 43	AE7	B	300	313	Right-handed alpha
Helix 44	AE8	B	317	332	Right-handed alpha
Helix 45	AE9	B	334	346	Right-handed alpha
Helix 46	AF1	B	347	357	Right-handed alpha
Helix 47	AF2	B	361	383	Right-handed alpha
Helix 48	AF3	B	387	398	Right-handed alpha
Helix 49	AF4	B	400	411	Right-handed alpha
Helix 50	AF5	B	430	439	Right-handed alpha
Helix 51	AF6	B	442	458	Right-handed alpha
Helix 52	AF7	B	503	505	Right-handed 310
Helix 53	AF8	B	506	536	Right-handed alpha
Helix 54	AF9	B	538	565	Right-handed alpha
Helix 55	AG1	B	587	592	Right-handed alpha
Helix 56	AG2	B	619	635	Right-handed alpha
Helix 57	AG3	B	668	684	Right-handed alpha
Helix 58	AG4	B	700	718	Right-handed alpha
Helix 59	AG5	B	729	733	Right-handed 310
Helix 60	AG6	B	734	739	Right-handed alpha
Helix 61	AG7	B	771	779	Right-handed alpha
Helix 62	AG8	B	782	799	Right-handed alpha

There are 11 sheets in PDB entry 6I5F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	30	first strand
Strand 2	A	90	92	parallel
Strand 3	A	112	114	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	39	first strand
Strand 2	A	67	72	anti-parallel
Strand 3	A	55	57	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	199	first strand
Strand 2	A	177	181	parallel
Strand 3	A	133	139	parallel
Strand 4	A	142	148	anti-parallel
Strand 5	A	155	158	anti-parallel
Strand 6	A	258	260	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	464	468	first strand
Strand 2	A	472	478	anti-parallel
Strand 3	A	498	502	anti-parallel
Strand 4	A	490	494	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	571	572	first strand
Strand 2	A	644	647	parallel
Strand 3	A	578	583	anti-parallel
Strand 4	A	599	603	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	653	656	first strand
Strand 2	A	689	693	parallel
Strand 3	A	722	726	parallel
Strand 4	A	607	613	parallel
Strand 5	A	741	750	parallel
Strand 6	A	757	764	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	61	first strand
Strand 2	B	64	72	anti-parallel
Strand 3	B	36	40	anti-parallel
Strand 4	B	28	33	anti-parallel
Strand 5	B	90	93	parallel
Strand 6	B	110	114	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	196	199	first strand
Strand 2	B	177	181	parallel
Strand 3	B	133	138	parallel
Strand 4	B	143	148	anti-parallel
Strand 5	B	155	158	anti-parallel
Strand 6	B	259	260	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	463	468	first strand
Strand 2	B	472	477	anti-parallel
Strand 3	B	499	502	anti-parallel
Strand 4	B	490	491	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	571	572	first strand
Strand 2	B	644	647	parallel
Strand 3	B	578	583	anti-parallel
Strand 4	B	599	603	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	653	656	first strand
Strand 2	B	689	693	parallel
Strand 3	B	722	726	parallel
Strand 4	B	609	613	parallel
Strand 5	B	742	751	parallel
Strand 6	B	756	764	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I5F

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I5F