Analysis of interatomic Contacts of Structural Units in PDB entry:
6I5S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I5S entry

There are 2 chains in PDB entry 6I5S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9ILE 182
A
 VAL 184PRO 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6I5S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 32Right-handed alpha
Helix 2
AA2
A
99 109Right-handed alpha
Helix 3
AA3
A
120 133Right-handed alpha
Helix 4
AA4
A
163 178Right-handed alpha
Helix 5
AA5
A
189 204Right-handed alpha
Helix 6
AA6
A
216 224Right-handed alpha
Helix 7
AA7
A
236 240Right-handed 310
Helix 8
AA8
A
241 243Right-handed 310
Helix 9
AA9
A
244 255Right-handed alpha
Helix 10
AB1
A
261 265Right-handed 310
Helix 11
AB2
A
272 280Right-handed alpha
Helix 12
AB3
A
289 296Right-handed alpha
Helix 13
AB4
A
300 314Right-handed alpha
Helix 14
AB5
A
315 339Right-handed alpha
Helix 15
AB6
A
357 370Right-handed alpha
Helix 16
AB7
A
373 382Right-handed alpha
Helix 17
AB8
A
382 389Right-handed alpha
Helix 18
AB9
A
431 445Right-handed alpha
Helix 19
AC1
A
448 452Right-handed 310
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There are 5 sheets in PDB entry 6I5S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 71first strand
Strand 2
A
57 62anti-parallel
Strand 3
A
38 45anti-parallel
Strand 4
A
84 88parallel
Strand 5
A
402 405anti-parallel
Strand 6
A
421 424anti-parallel
Strand 7
A
427 430anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 95first strand
Strand 2
A
111 116parallel
Strand 3
A
139 142parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
159 160parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 184first strand
Strand 2
A
207 209parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
268 270parallel
Strand 3
A
342 343parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il