Analysis of interatomic Contacts of Structural Units in PDB entry:
6I5U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I5U entry

There are 6 chains in PDB entry 6I5U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	ILE 35	SER 347
E	ILE 35	SER 347
D	ILE 35	SER 347
C	ILE 35	SER 347
B	ILE 35	SER 347
A	ILE 35	SER 347

There are 36 helices in PDB entry 6I5U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	54	66	Right-handed alpha
Helix 2	AA2	F	96	108	Right-handed alpha
Helix 3	AA3	F	115	127	Right-handed alpha
Helix 4	AA4	F	202	210	Right-handed alpha
Helix 5	AA5	F	211	213	Right-handed 310
Helix 6	AA6	F	225	239	Right-handed alpha
Helix 7	AA7	E	54	66	Right-handed alpha
Helix 8	AA8	E	96	108	Right-handed alpha
Helix 9	AA9	E	115	127	Right-handed alpha
Helix 10	AB1	E	202	210	Right-handed alpha
Helix 11	AB2	E	211	213	Right-handed 310
Helix 12	AB3	E	225	239	Right-handed alpha
Helix 13	AB4	D	54	66	Right-handed alpha
Helix 14	AB5	D	96	108	Right-handed alpha
Helix 15	AB6	D	115	127	Right-handed alpha
Helix 16	AB7	D	202	210	Right-handed alpha
Helix 17	AB8	D	211	213	Right-handed 310
Helix 18	AB9	D	225	239	Right-handed alpha
Helix 19	AC1	C	54	66	Right-handed alpha
Helix 20	AC2	C	96	108	Right-handed alpha
Helix 21	AC3	C	115	127	Right-handed alpha
Helix 22	AC4	C	202	210	Right-handed alpha
Helix 23	AC5	C	211	213	Right-handed 310
Helix 24	AC6	C	225	239	Right-handed alpha
Helix 25	AC7	B	54	66	Right-handed alpha
Helix 26	AC8	B	96	108	Right-handed alpha
Helix 27	AC9	B	115	127	Right-handed alpha
Helix 28	AD1	B	202	210	Right-handed alpha
Helix 29	AD2	B	211	213	Right-handed 310
Helix 30	AD3	B	225	239	Right-handed alpha
Helix 31	AD4	A	54	66	Right-handed alpha
Helix 32	AD5	A	96	108	Right-handed alpha
Helix 33	AD6	A	115	127	Right-handed alpha
Helix 34	AD7	A	202	210	Right-handed alpha
Helix 35	AD8	A	211	213	Right-handed 310
Helix 36	AD9	A	225	239	Right-handed alpha

There are 21 sheets in PDB entry 6I5U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	157	160	first strand
Strand 2	F	148	151	anti-parallel
Strand 3	F	131	135	anti-parallel
Strand 4	F	71	73	parallel
Strand 5	F	36	41	parallel
Strand 6	F	301	306	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	138	139	first strand
Strand 2	F	144	145	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	186	187	first strand
Strand 2	F	190	194	anti-parallel
Strand 3	F	216	220	parallel
Strand 4	F	242	246	parallel
Strand 5	F	283	284	anti-parallel
Strand 6	F	290	292	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	330	334	first strand
Strand 2	F	330	335	anti-parallel
Strand 3	D	342	345	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	157	160	first strand
Strand 2	E	148	151	anti-parallel
Strand 3	E	131	135	anti-parallel
Strand 4	E	71	73	parallel
Strand 5	E	36	41	parallel
Strand 6	E	301	306	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	138	139	first strand
Strand 2	E	144	145	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	187	first strand
Strand 2	E	190	194	anti-parallel
Strand 3	E	216	220	parallel
Strand 4	E	242	246	parallel
Strand 5	E	283	284	anti-parallel
Strand 6	E	290	292	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	342	345	first strand
Strand 2	C	330	335	parallel
Strand 3	D	330	335	anti-parallel
Strand 4	B	342	345	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	160	first strand
Strand 2	D	148	151	anti-parallel
Strand 3	D	131	135	anti-parallel
Strand 4	D	71	73	parallel
Strand 5	D	36	41	parallel
Strand 6	D	301	306	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	138	139	first strand
Strand 2	D	144	145	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	187	first strand
Strand 2	D	190	194	anti-parallel
Strand 3	D	216	220	parallel
Strand 4	D	242	246	parallel
Strand 5	D	283	284	anti-parallel
Strand 6	D	290	292	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	160	first strand
Strand 2	C	148	151	anti-parallel
Strand 3	C	131	135	anti-parallel
Strand 4	C	71	73	parallel
Strand 5	C	36	41	parallel
Strand 6	C	301	306	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	138	139	first strand
Strand 2	C	144	145	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	187	first strand
Strand 2	C	190	194	anti-parallel
Strand 3	C	216	220	parallel
Strand 4	C	242	246	parallel
Strand 5	C	283	284	anti-parallel
Strand 6	C	290	292	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	342	345	first strand
Strand 2	A	330	335	parallel
Strand 3	B	330	334	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	160	first strand
Strand 2	B	148	151	anti-parallel
Strand 3	B	131	135	anti-parallel
Strand 4	B	71	73	parallel
Strand 5	B	36	41	parallel
Strand 6	B	301	306	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	139	first strand
Strand 2	B	144	145	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	187	first strand
Strand 2	B	190	194	anti-parallel
Strand 3	B	216	220	parallel
Strand 4	B	242	246	parallel
Strand 5	B	283	284	anti-parallel
Strand 6	B	290	292	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	160	first strand
Strand 2	A	148	151	anti-parallel
Strand 3	A	131	135	anti-parallel
Strand 4	A	71	73	parallel
Strand 5	A	36	41	parallel
Strand 6	A	301	306	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	139	first strand
Strand 2	A	144	145	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	190	194	anti-parallel
Strand 3	A	216	220	parallel
Strand 4	A	242	246	parallel
Strand 5	A	283	284	anti-parallel
Strand 6	A	290	292	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I5U

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I5U