Analysis of interatomic Contacts of Structural Units in PDB entry:
6I5W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I5W entry

There is 1 chain in PDB entry 6I5W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 35ASN 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6I5W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 45Right-handed 310
Helix 2
AA2
A
64 69Right-handed 310
Helix 3
AA3
A
76 85Right-handed alpha
Helix 4
AA4
A
100 112Right-handed alpha
Helix 5
AA5
A
128 133Right-handed alpha
Helix 6
AA6
A
139 143Right-handed alpha
Helix 7
AA7
A
174 180Right-handed alpha
Helix 8
AA8
A
188 203Right-handed alpha
Helix 9
AA9
A
214 220Right-handed alpha
Helix 10
AB1
A
221 225Right-handed 310
Helix 11
AB2
A
226 231Right-handed alpha
Helix 12
AB3
A
239 243Right-handed 310
Helix 13
AB4
A
256 271Right-handed alpha
Helix 14
AB5
A
277 281Right-handed 310
Helix 15
AB6
A
282 292Right-handed alpha
Helix 16
AB7
A
303 311Right-handed alpha
Helix 17
AB8
A
314 316Right-handed 310
Helix 18
AB9
A
348 365Right-handed alpha
Helix 19
AC1
A
367 372Right-handed alpha
Helix 20
AC2
A
388 392Right-handed 310
Helix 21
AC3
A
408 418Right-handed alpha
Helix 22
AC4
A
426 438Right-handed alpha
Helix 23
AC5
A
442 461Right-handed alpha
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There are 4 sheets in PDB entry 6I5W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 97first strand
Strand 2
A
56 62parallel
Strand 3
A
118 120parallel
Strand 4
A
340 343anti-parallel
Strand 5
A
161 162anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
157 158anti-parallel
Strand 3
A
153 154anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
295 301parallel
Strand 3
A
165 173anti-parallel
Strand 4
A
318 322anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
295 301parallel
Strand 3
A
165 173anti-parallel
Strand 4
A
332 337anti-parallel
Strand 5
A
395 397parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il