Analysis of interatomic Contacts of Structural Units in PDB entry:
6I5Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I5Z entry

There are 4 chains in PDB entry 6I5Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 33	LYS 390
B	CYS 34	LYS 390
C	VAL 33	LYS 390
D	VAL 33	LYS 390

There are 75 helices in PDB entry 6I5Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	42	Right-handed alpha
Helix 2	AA2	A	43	45	Right-handed 310
Helix 3	AA3	A	46	59	Right-handed alpha
Helix 4	AA4	A	59	66	Right-handed alpha
Helix 5	AA5	A	75	81	Right-handed alpha
Helix 6	AA6	A	82	86	Right-handed 310
Helix 7	AA7	A	90	106	Right-handed alpha
Helix 8	AA8	A	134	139	Right-handed alpha
Helix 9	AA9	A	150	158	Right-handed alpha
Helix 10	AB1	A	159	168	Right-handed alpha
Helix 11	AB2	A	169	173	Right-handed 310
Helix 12	AB3	A	179	185	Right-handed alpha
Helix 13	AB4	A	188	196	Right-handed alpha
Helix 14	AB5	A	196	220	Right-handed alpha
Helix 15	AB6	A	239	249	Right-handed alpha
Helix 16	AB7	A	259	264	Right-handed alpha
Helix 17	AB8	A	294	298	Right-handed 310
Helix 18	AB9	A	299	313	Right-handed alpha
Helix 19	AC1	A	334	351	Right-handed alpha
Helix 20	AC2	A	358	370	Right-handed alpha
Helix 21	AC3	B	35	44	Right-handed alpha
Helix 22	AC4	B	46	58	Right-handed alpha
Helix 23	AC5	B	59	67	Right-handed alpha
Helix 24	AC6	B	74	81	Right-handed alpha
Helix 25	AC7	B	90	106	Right-handed alpha
Helix 26	AC8	B	134	139	Right-handed alpha
Helix 27	AC9	B	150	158	Right-handed alpha
Helix 28	AD1	B	159	167	Right-handed alpha
Helix 29	AD2	B	170	175	Right-handed alpha
Helix 30	AD3	B	179	186	Right-handed alpha
Helix 31	AD4	B	188	196	Right-handed alpha
Helix 32	AD5	B	196	222	Right-handed alpha
Helix 33	AD6	B	239	248	Right-handed alpha
Helix 34	AD7	B	259	264	Right-handed alpha
Helix 35	AD8	B	294	298	Right-handed 310
Helix 36	AD9	B	299	314	Right-handed alpha
Helix 37	AE1	B	334	351	Right-handed alpha
Helix 38	AE2	B	358	369	Right-handed alpha
Helix 39	AE3	C	34	58	Right-handed alpha
Helix 40	AE4	C	59	66	Right-handed alpha
Helix 41	AE5	C	74	81	Right-handed alpha
Helix 42	AE6	C	82	86	Right-handed 310
Helix 43	AE7	C	90	105	Right-handed alpha
Helix 44	AE8	C	134	139	Right-handed alpha
Helix 45	AE9	C	150	158	Right-handed alpha
Helix 46	AF1	C	159	167	Right-handed alpha
Helix 47	AF2	C	170	175	Right-handed alpha
Helix 48	AF3	C	179	186	Right-handed alpha
Helix 49	AF4	C	188	196	Right-handed alpha
Helix 50	AF5	C	196	219	Right-handed alpha
Helix 51	AF6	C	239	249	Right-handed alpha
Helix 52	AF7	C	259	264	Right-handed alpha
Helix 53	AF8	C	294	298	Right-handed 310
Helix 54	AF9	C	299	313	Right-handed alpha
Helix 55	AG1	C	334	351	Right-handed alpha
Helix 56	AG2	C	358	370	Right-handed alpha
Helix 57	AG3	D	34	43	Right-handed alpha
Helix 58	AG4	D	46	58	Right-handed alpha
Helix 59	AG5	D	59	66	Right-handed alpha
Helix 60	AG6	D	75	79	Right-handed alpha
Helix 61	AG7	D	82	86	Right-handed 310
Helix 62	AG8	D	90	106	Right-handed alpha
Helix 63	AG9	D	134	139	Right-handed alpha
Helix 64	AH1	D	150	158	Right-handed alpha
Helix 65	AH2	D	159	167	Right-handed alpha
Helix 66	AH3	D	169	175	Right-handed alpha
Helix 67	AH4	D	179	185	Right-handed alpha
Helix 68	AH5	D	188	195	Right-handed alpha
Helix 69	AH6	D	196	221	Right-handed alpha
Helix 70	AH7	D	240	246	Right-handed alpha
Helix 71	AH8	D	259	264	Right-handed alpha
Helix 72	AH9	D	294	298	Right-handed 310
Helix 73	AI1	D	299	312	Right-handed alpha
Helix 74	AI2	D	334	350	Right-handed alpha
Helix 75	AI3	D	358	370	Right-handed alpha

There are 8 sheets in PDB entry 6I5Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	74	first strand
Strand 2	A	130	131	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	276	first strand
Strand 2	A	253	258	parallel
Strand 3	A	230	234	parallel
Strand 4	A	289	292	parallel
Strand 5	A	319	323	parallel
Strand 6	A	386	389	anti-parallel
Strand 7	A	373	376	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	113	first strand
Strand 2	B	128	132	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	276	first strand
Strand 2	B	253	258	parallel
Strand 3	B	230	234	parallel
Strand 4	B	289	292	parallel
Strand 5	B	319	325	parallel
Strand 6	B	383	389	anti-parallel
Strand 7	B	373	380	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	110	first strand
Strand 2	C	131	132	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	272	275	first strand
Strand 2	C	253	257	parallel
Strand 3	C	230	234	parallel
Strand 4	C	288	292	parallel
Strand 5	C	319	325	parallel
Strand 6	C	383	389	anti-parallel
Strand 7	C	373	380	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	74	first strand
Strand 2	D	130	132	anti-parallel
Strand 3	D	109	111	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	272	276	first strand
Strand 2	D	253	258	parallel
Strand 3	D	230	233	parallel
Strand 4	D	288	290	parallel
Strand 5	D	319	322	parallel
Strand 6	D	383	389	anti-parallel
Strand 7	D	377	380	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I5Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I5Z