Analysis of interatomic Contacts of Structural Units in PDB entry:
6I6Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I6Z entry

There are 2 chains in PDB entry 6I6Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 113PRO 418
B
 ARG 112PRO 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 6I6Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
124 139Right-handed alpha
Helix 2
AA2
A
182 200Right-handed alpha
Helix 3
AA3
A
203 211Right-handed alpha
Helix 4
AA4
A
222 232Right-handed alpha
Helix 5
AA5
A
252 256Right-handed 310
Helix 6
AA6
A
283 297Right-handed alpha
Helix 7
AA7
A
325 342Right-handed alpha
Helix 8
AA8
A
353 357Right-handed alpha
Helix 9
AA9
A
363 371Right-handed alpha
Helix 10
AB1
A
392 394Right-handed 310
Helix 11
AB2
A
395 417Right-handed alpha
Helix 12
AB3
B
124 139Right-handed alpha
Helix 13
AB4
B
182 200Right-handed alpha
Helix 14
AB5
B
203 213Right-handed alpha
Helix 15
AB6
B
222 232Right-handed alpha
Helix 16
AB7
B
252 256Right-handed 310
Helix 17
AB8
B
283 297Right-handed alpha
Helix 18
AB9
B
325 342Right-handed alpha
Helix 19
AC1
B
353 357Right-handed alpha
Helix 20
AC2
B
363 371Right-handed alpha
Helix 21
AC3
B
392 394Right-handed 310
Helix 22
AC4
B
395 417Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6I6Z. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 150first strand
Strand 2
A
156 162anti-parallel
Strand 3
A
214 218anti-parallel
Strand 4
A
171 176parallel
Strand 5
A
299 306parallel
Strand 6
A
375 380parallel
Strand 7
A
311 314anti-parallel
Strand 8
A
349 352parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 150first strand
Strand 2
B
156 162anti-parallel
Strand 3
B
214 218anti-parallel
Strand 4
B
171 176parallel
Strand 5
B
299 306parallel
Strand 6
B
375 380parallel
Strand 7
B
311 314anti-parallel
Strand 8
B
349 352parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il