Analysis of interatomic Contacts of Structural Units in PDB entry:
6I7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I7M entry

There are 4 chains in PDB entry 6I7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 21PHE 489
B
 SER 402PHE 420
C
 ASN 21PHE 489
D
 SER 402PHE 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6I7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 48Right-handed alpha
Helix 2
AA2
A
56 71Right-handed alpha
Helix 3
AA3
A
112 124Right-handed alpha
Helix 4
AA4
A
129 148Right-handed alpha
Helix 5
AA5
A
150 158Right-handed alpha
Helix 6
AA6
A
160 167Right-handed 310
Helix 7
AA7
A
177 182Right-handed alpha
Helix 8
AA8
A
185 202Right-handed alpha
Helix 9
AA9
A
214 230Right-handed alpha
Helix 10
AB1
A
232 244Right-handed alpha
Helix 11
AB2
A
249 263Right-handed alpha
Helix 12
AB3
A
277 287Right-handed alpha
Helix 13
AB4
A
290 295Right-handed alpha
Helix 14
AB5
A
300 307Right-handed alpha
Helix 15
AB6
A
321 335Right-handed alpha
Helix 16
AB7
A
340 349Right-handed alpha
Helix 17
AB8
C
23 48Right-handed alpha
Helix 18
AB9
C
56 71Right-handed alpha
Helix 19
AC1
C
112 124Right-handed alpha
Helix 20
AC2
C
129 148Right-handed alpha
Helix 21
AC3
C
150 158Right-handed alpha
Helix 22
AC4
C
160 167Right-handed 310
Helix 23
AC5
C
177 182Right-handed alpha
Helix 24
AC6
C
185 202Right-handed alpha
Helix 25
AC7
C
214 230Right-handed alpha
Helix 26
AC8
C
232 244Right-handed alpha
Helix 27
AC9
C
249 263Right-handed alpha
Helix 28
AD1
C
277 287Right-handed alpha
Helix 29
AD2
C
290 295Right-handed alpha
Helix 30
AD3
C
300 307Right-handed alpha
Helix 31
AD4
C
321 335Right-handed alpha
Helix 32
AD5
C
340 349Right-handed alpha
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There are 6 sheets in PDB entry 6I7M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 99first strand
Strand 2
A
104 110anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 316first strand
Strand 2
A
375 378anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 457first strand
Strand 2
B
416 417anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
93 99first strand
Strand 2
C
104 110anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
313 316first strand
Strand 2
C
375 378anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
456 457first strand
Strand 2
D
416 417anti-parallel
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