Analysis of interatomic Contacts of Structural Units in PDB entry:
6I8W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I8W entry

There are 2 chains in PDB entry 6I8W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ALA 310
B
 LYS 2ALA 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6I8W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 20Right-handed alpha
Helix 2
AA2
A
20 39Right-handed alpha
Helix 3
AA3
A
74 77Right-handed 310
Helix 4
AA4
A
78 83Right-handed alpha
Helix 5
AA5
A
111 126Right-handed alpha
Helix 6
AA6
A
137 150Right-handed alpha
Helix 7
AA7
A
171 178Right-handed alpha
Helix 8
AA8
A
190 200Right-handed alpha
Helix 9
AA9
A
207 235Right-handed alpha
Helix 10
AB1
A
242 246Right-handed 310
Helix 11
AB2
A
264 270Right-handed alpha
Helix 12
AB3
A
271 273Right-handed 310
Helix 13
AB4
A
287 292Right-handed alpha
Helix 14
AB5
A
292 309Right-handed alpha
Helix 15
AB6
B
2 38Right-handed alpha
Helix 16
AB7
B
74 77Right-handed 310
Helix 17
AB8
B
78 83Right-handed alpha
Helix 18
AB9
B
111 126Right-handed alpha
Helix 19
AC1
B
137 150Right-handed alpha
Helix 20
AC2
B
171 178Right-handed alpha
Helix 21
AC3
B
190 200Right-handed alpha
Helix 22
AC4
B
207 235Right-handed alpha
Helix 23
AC5
B
242 246Right-handed 310
Helix 24
AC6
B
264 270Right-handed alpha
Helix 25
AC7
B
271 273Right-handed 310
Helix 26
AC8
B
287 292Right-handed alpha
Helix 27
AC9
B
292 309Right-handed alpha
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There are 2 sheets in PDB entry 6I8W. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 47first strand
Strand 2
A
50 57anti-parallel
Strand 3
A
90 94anti-parallel
Strand 4
A
64 68parallel
Strand 5
A
131 136parallel
Strand 6
A
154 160parallel
Strand 7
A
250 255parallel
Strand 8
A
276 281parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 47first strand
Strand 2
B
50 57anti-parallel
Strand 3
B
90 94anti-parallel
Strand 4
B
64 68parallel
Strand 5
B
131 136parallel
Strand 6
B
154 160parallel
Strand 7
B
250 255parallel
Strand 8
B
276 281parallel
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