Analysis of interatomic Contacts of Structural Units in PDB entry:
6I9Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I9Q entry

There is 1 chain in PDB entry 6I9Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 105ALA 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6I9Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
110 115Right-handed 310
Helix 2
AA2
A
122 128Right-handed alpha
Helix 3
AA3
A
132 139Right-handed alpha
Helix 4
AA4
A
140 147Right-handed alpha
Helix 5
AA5
A
164 166Right-handed 310
Helix 6
AA6
A
179 193Right-handed alpha
Helix 7
AA7
A
213 215Right-handed 310
Helix 8
AA8
A
216 234Right-handed alpha
Helix 9
AA9
A
243 247Right-handed 310
Helix 10
AB1
A
249 265Right-handed alpha
Helix 11
AB2
A
278 288Right-handed alpha
Helix 12
AB3
A
297 301Right-handed 310
Helix 13
AB4
A
305 320Right-handed alpha
Helix 14
AB5
A
334 339Right-handed alpha
Helix 15
AB6
A
340 342Right-handed 310
Helix 16
AB7
A
343 354Right-handed alpha
Helix 17
AB8
A
387 391Right-handed 310
Helix 18
AB9
A
397 400Right-handed 310
Helix 19
AC1
A
401 407Right-handed alpha
Helix 20
AC2
A
411 426Right-handed alpha
Helix 21
AC3
A
426 432Right-handed alpha
Helix 22
AC4
A
493 501Right-handed alpha
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There are 4 sheets in PDB entry 6I9Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
269 273parallel
Strand 3
A
238 241parallel
Strand 4
A
196 200parallel
Strand 5
A
151 154parallel
Strand 6
A
117 120parallel
Strand 7
A
357 361parallel
Strand 8
A
326 327parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 160first strand
Strand 2
A
168 173anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
433 436first strand
Strand 2
A
443 449anti-parallel
Strand 3
A
455 461anti-parallel
Strand 4
A
517 522anti-parallel
Strand 5
A
485 491anti-parallel
Strand 6
A
504 506anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 468first strand
Strand 2
A
511 512anti-parallel
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