Analysis of interatomic Contacts of Structural Units in PDB entry:
6IAC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IAC entry

There are 11 chains in PDB entry 6IAC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 6GLY 327
B
 ARG 3TRP 251
D
 PHE 8ASP 146
E
 GLU 5ASN 150
F
 THR 24ASP 144
G
 VAL 77LEU 94
H
 VAL 77LEU 94
I
 VAL 77GLN 100
J
 VAL 77GLN 100
K
 VAL 77MET 98
L
 VAL 77GLN 100
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6IAC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 39Right-handed alpha
Helix 2
AA2
A
54 63Right-handed alpha
Helix 3
AA3
A
152 177Right-handed alpha
Helix 4
AA4
A
192 200Right-handed alpha
Helix 5
AA5
A
227 247Right-handed alpha
Helix 6
AA6
A
253 261Right-handed alpha
Helix 7
AA7
A
270 285Right-handed alpha
Helix 8
AA8
A
286 295Right-handed alpha
Helix 9
AA9
A
310 315Right-handed alpha
Helix 10
AB1
A
320 327Right-handed alpha
Helix 11
AB2
B
8 19Right-handed alpha
Helix 12
AB3
B
38 46Right-handed alpha
Helix 13
AB4
B
47 58Right-handed alpha
Helix 14
AB5
B
68 79Right-handed alpha
Helix 15
AB6
B
95 102Right-handed alpha
Helix 16
AB7
B
226 231Right-handed alpha
Helix 17
AB8
B
235 246Right-handed alpha
Helix 18
AB9
D
14 19Right-handed alpha
Helix 19
AC1
D
20 23Right-handed 310
Helix 20
AC2
D
42 53Right-handed alpha
Helix 21
AC3
D
54 84Right-handed alpha
Helix 22
AC4
D
84 98Right-handed alpha
Helix 23
AC5
D
100 141Right-handed alpha
Helix 24
AC6
D
142 146Right-handed 310
Helix 25
AC7
E
14 17Right-handed 310
Helix 26
AC8
E
18 27Right-handed alpha
Helix 27
AC9
E
44 65Right-handed alpha
Helix 28
AD1
E
65 74Right-handed alpha
Helix 29
AD2
E
74 104Right-handed alpha
Helix 30
AD3
E
107 146Right-handed alpha
Helix 31
AD4
E
147 149Right-handed 310
Helix 32
AD5
F
44 83Right-handed alpha
Helix 33
AD6
F
83 93Right-handed alpha
Helix 34
AD7
F
96 106Right-handed alpha
Helix 35
AD8
F
110 135Right-handed alpha
Helix 36
AD9
F
136 139Right-handed 310
Helix 37
AE1
G
78 94Right-handed alpha
Helix 38
AE2
H
78 94Right-handed alpha
Helix 39
AE3
I
78 98Right-handed alpha
Helix 40
AE4
J
78 97Right-handed alpha
Helix 41
AE5
K
78 94Right-handed alpha
Helix 42
AE6
L
78 95Right-handed alpha
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There are 7 sheets in PDB entry 6IAC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
68 71anti-parallel
Strand 3
A
140 143anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
220 222anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
117 118first strand
Strand 2
B
219 220anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 127first strand
Strand 2
B
210 216anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 132first strand
Strand 2
B
205 206anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 139first strand
Strand 2
B
198 202anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 150first strand
Strand 2
B
187 190anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il