Analysis of interatomic Contacts of Structural Units in PDB entry:
6IAE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IAE entry

There are 2 chains in PDB entry 6IAE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3LEU 197
B
 LEU 5GLU 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6IAE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 27Right-handed alpha
Helix 2
AA2
A
104 117Right-handed alpha
Helix 3
AA3
A
180 195Right-handed alpha
Helix 4
AA4
B
17 27Right-handed alpha
Helix 5
AA5
B
104 116Right-handed alpha
Helix 6
AA6
B
180 200Right-handed alpha
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There are 2 sheets in PDB entry 6IAE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
68 73anti-parallel
Strand 3
A
6 11parallel
Strand 4
A
93 98parallel
Strand 5
A
138 143parallel
Strand 6
A
169 172parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 47first strand
Strand 2
B
69 74anti-parallel
Strand 3
B
6 11parallel
Strand 4
B
93 98parallel
Strand 5
B
138 143parallel
Strand 6
B
170 172parallel
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