Analysis of interatomic Contacts of Structural Units in PDB entry:
6IAH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IAH entry

There is 1 chain in PDB entry 6IAH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLY 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6IAH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
16 33Right-handed alpha
Helix 2
AA2
A
40 51Right-handed alpha
Helix 3
AA3
A
55 69Right-handed alpha
Helix 4
AA4
A
71 79Right-handed alpha
Helix 5
AA5
A
84 93Right-handed alpha
Helix 6
AA6
A
99 111Right-handed alpha
Helix 7
AA7
A
112 114Right-handed 310
Helix 8
AA8
A
123 128Right-handed 310
Helix 9
AA9
A
133 142Right-handed alpha
Helix 10
AB1
A
153 165Right-handed alpha
Helix 11
AB2
A
182 190Right-handed alpha
Helix 12
AB3
A
200 214Right-handed alpha
Helix 13
AB4
A
228 240Right-handed alpha
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There are 2 sheets in PDB entry 6IAH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
171 172first strand
Strand 2
A
145 149parallel
Strand 3
A
2 5parallel
Strand 4
A
194 198parallel
Strand 5
A
218 221parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
12 13first strand
Strand 2
A
129 130anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il