Analysis of interatomic Contacts of Structural Units in PDB entry:
6IAK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IAK entry

There are 7 chains in PDB entry 6IAK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 210LEU 277
B
ARG 217VAL 278
C
VAL 215GLN 275
D
LYS 213LEU 274
E
GLU 209GLN 275
F
THR 205GLN 275
G
ILE 219LYS 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6IAK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
212 217Right-handed alpha
Helix 2
AA2
A
218 273Right-handed alpha
Helix 3
AA3
B
218 276Right-handed alpha
Helix 4
AA4
C
216 275Right-handed alpha
Helix 5
AA5
D
214 273Right-handed alpha
Helix 6
AA6
E
210 273Right-handed alpha
Helix 7
AA7
F
206 273Right-handed alpha
Helix 8
AA8
G
221 255Right-handed alpha
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There are no sheets in PDB entry 6IAK

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il