Analysis of interatomic Contacts of Structural Units in PDB entry:
6IBB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IBB entry

There are 4 chains in PDB entry 6IBB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 6GLN 323
B
 VAL 10GLN 142
C
 CYS 7LYS 304
D
 GLU 9SER 135
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6IBB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 20Right-handed alpha
Helix 2
AA2
A
20 48Right-handed alpha
Helix 3
AA3
A
52 70Right-handed alpha
Helix 4
AA4
A
71 82Right-handed alpha
Helix 5
AA5
A
86 122Right-handed alpha
Helix 6
AA6
A
127 130Right-handed 310
Helix 7
AA7
A
131 151Right-handed alpha
Helix 8
AA8
A
152 156Right-handed 310
Helix 9
AA9
A
170 174Right-handed 310
Helix 10
AB1
A
176 192Right-handed alpha
Helix 11
AB2
A
192 212Right-handed alpha
Helix 12
AB3
A
226 254Right-handed alpha
Helix 13
AB4
A
263 281Right-handed alpha
Helix 14
AB5
A
281 286Right-handed alpha
Helix 15
AB6
A
287 292Right-handed 310
Helix 16
AB7
A
296 314Right-handed alpha
Helix 17
AB8
A
315 323Right-handed alpha
Helix 18
AB9
B
94 98Right-handed 310
Helix 19
AC1
B
111 114Right-handed 310
Helix 20
AC2
B
115 120Right-handed alpha
Helix 21
AC3
B
121 123Right-handed 310
Helix 22
AC4
B
136 142Right-handed alpha
Helix 23
AC5
C
8 20Right-handed alpha
Helix 24
AC6
C
20 47Right-handed alpha
Helix 25
AC7
C
52 70Right-handed alpha
Helix 26
AC8
C
71 82Right-handed alpha
Helix 27
AC9
C
86 122Right-handed alpha
Helix 28
AD1
C
127 130Right-handed 310
Helix 29
AD2
C
131 151Right-handed alpha
Helix 30
AD3
C
151 156Right-handed alpha
Helix 31
AD4
C
170 174Right-handed 310
Helix 32
AD5
C
176 192Right-handed alpha
Helix 33
AD6
C
192 217Right-handed alpha
Helix 34
AD7
C
226 255Right-handed alpha
Helix 35
AD8
C
263 280Right-handed alpha
Helix 36
AD9
C
281 286Right-handed alpha
Helix 37
AE1
C
287 292Right-handed 310
Helix 38
AE2
C
296 304Right-handed alpha
Helix 39
AE3
D
69 72Right-handed 310
Helix 40
AE4
D
94 98Right-handed 310
Helix 41
AE5
D
115 120Right-handed alpha
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There are 5 sheets in PDB entry 6IBB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
26 31anti-parallel
Strand 3
B
85 90anti-parallel
Strand 4
B
75 79anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 20first strand
Strand 2
B
130 134parallel
Strand 3
B
99 106anti-parallel
Strand 4
B
41 47anti-parallel
Strand 5
B
54 59anti-parallel
Strand 6
B
65 67anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
13 14first strand
Strand 2
D
26 31anti-parallel
Strand 3
D
85 90anti-parallel
Strand 4
D
75 79anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 20first strand
Strand 2
D
130 134parallel
Strand 3
D
99 106anti-parallel
Strand 4
D
41 47anti-parallel
Strand 5
D
54 59anti-parallel
Strand 6
D
65 67anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 20first strand
Strand 2
D
130 134parallel
Strand 3
D
99 106anti-parallel
Strand 4
D
125 126anti-parallel
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