Analysis of interatomic Contacts of Structural Units in PDB entry:
6ICA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ICA entry

There are 3 chains in PDB entry 6ICA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 47GLU 424
B
 SER 47GLU 424
C
 SER 47GLU 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6ICA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 61Right-handed alpha
Helix 2
AA2
A
85 97Right-handed alpha
Helix 3
AA3
A
106 110Right-handed 310
Helix 4
AA4
A
116 124Right-handed alpha
Helix 5
AA5
A
146 155Right-handed alpha
Helix 6
AA6
A
158 170Right-handed alpha
Helix 7
AA7
A
179 200Right-handed alpha
Helix 8
AA8
A
252 269Right-handed alpha
Helix 9
AA9
A
284 288Right-handed 310
Helix 10
AB1
A
289 302Right-handed alpha
Helix 11
AB2
A
334 349Right-handed alpha
Helix 12
AB3
A
364 370Right-handed alpha
Helix 13
AB4
A
396 400Right-handed 310
Helix 14
AB5
A
401 421Right-handed alpha
Helix 15
AB6
B
57 61Right-handed alpha
Helix 16
AB7
B
85 97Right-handed alpha
Helix 17
AB8
B
105 108Right-handed 310
Helix 18
AB9
B
117 124Right-handed alpha
Helix 19
AC1
B
146 155Right-handed alpha
Helix 20
AC2
B
158 170Right-handed alpha
Helix 21
AC3
B
179 200Right-handed alpha
Helix 22
AC4
B
252 268Right-handed alpha
Helix 23
AC5
B
284 288Right-handed 310
Helix 24
AC6
B
289 302Right-handed alpha
Helix 25
AC7
B
334 349Right-handed alpha
Helix 26
AC8
B
364 370Right-handed alpha
Helix 27
AC9
B
396 400Right-handed 310
Helix 28
AD1
B
401 421Right-handed alpha
Helix 29
AD2
C
57 61Right-handed alpha
Helix 30
AD3
C
85 97Right-handed alpha
Helix 31
AD4
C
116 124Right-handed alpha
Helix 32
AD5
C
146 155Right-handed alpha
Helix 33
AD6
C
158 171Right-handed alpha
Helix 34
AD7
C
179 200Right-handed alpha
Helix 35
AD8
C
252 268Right-handed alpha
Helix 36
AD9
C
284 288Right-handed 310
Helix 37
AE1
C
289 302Right-handed alpha
Helix 38
AE2
C
334 349Right-handed alpha
Helix 39
AE3
C
364 371Right-handed alpha
Helix 40
AE4
C
396 400Right-handed 310
Helix 41
AE5
C
401 421Right-handed alpha
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There are 8 sheets in PDB entry 6ICA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
76 82anti-parallel
Strand 3
A
50 56anti-parallel
Strand 4
A
102 103anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 212first strand
Strand 2
A
215 224anti-parallel
Strand 3
A
277 282anti-parallel
Strand 4
A
232 238parallel
Strand 5
A
306 311parallel
Strand 6
A
375 379parallel
Strand 7
A
326 329anti-parallel
Strand 8
A
353 356parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 72first strand
Strand 2
B
76 82anti-parallel
Strand 3
B
50 56anti-parallel
Strand 4
B
102 103anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 212first strand
Strand 2
B
215 224anti-parallel
Strand 3
B
277 282anti-parallel
Strand 4
B
232 238parallel
Strand 5
B
306 311parallel
Strand 6
B
375 376parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
353 356first strand
Strand 2
B
326 329parallel
Strand 3
B
378 379anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
68 72first strand
Strand 2
C
76 82anti-parallel
Strand 3
C
50 56anti-parallel
Strand 4
C
102 103anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
205 212first strand
Strand 2
C
215 224anti-parallel
Strand 3
C
277 282anti-parallel
Strand 4
C
232 238parallel
Strand 5
C
306 311parallel
Strand 6
C
375 376parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
353 356first strand
Strand 2
C
326 329parallel
Strand 3
C
378 379anti-parallel
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