Analysis of interatomic Contacts of Structural Units in PDB entry:
6IDX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IDX entry

There are 2 chains in PDB entry 6IDX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ARG 515
C
 ARG 1471GLN 1495
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6IDX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 41Right-handed alpha
Helix 2
AA2
A
45 47Right-handed 310
Helix 3
AA3
A
64 69Right-handed 310
Helix 4
AA4
A
80 92Right-handed alpha
Helix 5
AA5
A
96 111Right-handed alpha
Helix 6
AA6
A
113 122Right-handed alpha
Helix 7
AA7
A
124 136Right-handed alpha
Helix 8
AA8
A
143 159Right-handed alpha
Helix 9
AA9
A
164 168Right-handed 310
Helix 10
AB1
A
169 182Right-handed alpha
Helix 11
AB2
A
186 204Right-handed alpha
Helix 12
AB3
A
204 215Right-handed alpha
Helix 13
AB4
A
216 223Right-handed alpha
Helix 14
AB5
A
224 226Right-handed 310
Helix 15
AB6
A
228 246Right-handed alpha
Helix 16
AB7
A
247 249Right-handed 310
Helix 17
AB8
A
250 261Right-handed alpha
Helix 18
AB9
A
262 271Right-handed alpha
Helix 19
AC1
A
279 296Right-handed alpha
Helix 20
AC2
A
297 302Right-handed alpha
Helix 21
AC3
A
309 325Right-handed alpha
Helix 22
AC4
A
339 347Right-handed alpha
Helix 23
AC5
A
348 353Right-handed 310
Helix 24
AC6
A
359 366Right-handed 310
Helix 25
AC7
A
369 384Right-handed alpha
Helix 26
AC8
A
384 394Right-handed alpha
Helix 27
AC9
A
405 422Right-handed alpha
Helix 28
AD1
A
435 441Right-handed 310
Helix 29
AD2
A
443 463Right-handed alpha
Helix 30
AD3
A
466 468Right-handed 310
Helix 31
AD4
A
469 485Right-handed alpha
Helix 32
AD5
A
486 488Right-handed 310
Helix 33
AD6
A
491 501Right-handed alpha
Helix 34
AD7
A
503 515Right-handed alpha
Helix 35
AD8
C
1479 1485Right-handed alpha
Helix 36
AD9
C
1485 1494Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6IDX.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 25first strand
Strand 2
A
7 13anti-parallel
Strand 3
A
73 79parallel
Strand 4
A
49 53anti-parallel
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