Analysis of interatomic Contacts of Structural Units in PDB entry:
6IE7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6IE7 entry

There are 12 chains in PDB entry 6IE7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 6	LYS 147
E	ALA 1	ARG 8
E	SER 10	SER 10
B	LEU 5	LYS 147
F	ALA 1	ARG 8
F	SER 10	SER 10
C	PRO 6	LYS 147
G	ALA 1	ARG 8
G	SER 10	THR 11
D	PRO 6	LYS 147
H	ALA 1	ARG 8
H	SER 10	THR 11

There are 7 helices in PDB entry 6IE7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	10	Right-handed 310
Helix 2	AA2	A	83	87	Right-handed alpha
Helix 3	AA3	B	6	10	Right-handed 310
Helix 4	AA4	B	131	133	Right-handed 310
Helix 5	AA5	C	69	71	Right-handed 310
Helix 6	AA6	G	3	8	Right-handed alpha
Helix 7	AA7	D	6	10	Right-handed 310

There are 13 sheets in PDB entry 6IE7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	74	first strand
Strand 2	A	14	17	anti-parallel
Strand 3	A	27	35	anti-parallel
Strand 4	A	46	55	anti-parallel
Strand 5	A	63	69	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	137	first strand
Strand 2	A	94	99	anti-parallel
Strand 3	A	102	111	anti-parallel
Strand 4	A	27	35	anti-parallel
Strand 5	A	46	55	anti-parallel
Strand 6	E	2	3	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	131	first strand
Strand 2	A	116	121	anti-parallel
Strand 3	A	102	111	anti-parallel
Strand 4	A	94	99	anti-parallel
Strand 5	A	135	137	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	142	first strand
Strand 2	A	145	146	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	69	first strand
Strand 2	B	46	55	anti-parallel
Strand 3	B	27	35	anti-parallel
Strand 4	B	102	111	anti-parallel
Strand 5	B	117	121	anti-parallel
Strand 6	B	126	130	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	74	first strand
Strand 2	B	14	17	anti-parallel
Strand 3	B	27	35	anti-parallel
Strand 4	B	102	111	anti-parallel
Strand 5	B	94	99	anti-parallel
Strand 6	B	135	137	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	142	first strand
Strand 2	B	145	146	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	68	first strand
Strand 2	C	47	55	anti-parallel
Strand 3	C	27	35	anti-parallel
Strand 4	C	102	111	anti-parallel
Strand 5	C	116	121	anti-parallel
Strand 6	C	126	131	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	74	first strand
Strand 2	C	14	17	anti-parallel
Strand 3	C	27	35	anti-parallel
Strand 4	C	102	111	anti-parallel
Strand 5	C	94	99	anti-parallel
Strand 6	C	135	137	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	142	first strand
Strand 2	C	145	146	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	69	first strand
Strand 2	D	46	55	anti-parallel
Strand 3	D	27	33	anti-parallel
Strand 4	D	102	111	anti-parallel
Strand 5	D	116	121	anti-parallel
Strand 6	D	126	131	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	74	first strand
Strand 2	D	14	18	anti-parallel
Strand 3	D	27	33	anti-parallel
Strand 4	D	102	111	anti-parallel
Strand 5	D	94	99	anti-parallel
Strand 6	D	135	137	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	142	first strand
Strand 2	D	145	146	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6IE7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6IE7