Analysis of interatomic Contacts of Structural Units in PDB entry:
6IEU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IEU entry

There are 2 chains in PDB entry 6IEU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 965GLN 1155
C
ALA 1SER 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 6IEU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1011 1015Right-handed 310
Helix 2
AA2
A
1043 1060Right-handed alpha
Helix 3
AA3
A
1061 1067Right-handed 310
Helix 4
AA4
A
1076 1081Right-handed alpha
Helix 5
AA5
A
1086 1094Right-handed alpha
Helix 6
AA6
A
1104 1123Right-handed alpha
Helix 7
AA7
A
1127 1148Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 6IEU.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
991 992first strand
Strand 2
A
981 984anti-parallel
Strand 3
C
3 5anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il