Analysis of interatomic Contacts of Structural Units in PDB entry:
6IF3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IF3 entry

There are 2 chains in PDB entry 6IF3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 605ARG 770
B
 ALA 2LYS 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6IF3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
605 616Right-handed alpha
Helix 2
AA2
A
618 628Right-handed alpha
Helix 3
AA3
A
643 652Right-handed alpha
Helix 4
AA4
A
653 663Right-handed alpha
Helix 5
AA5
A
676 685Right-handed alpha
Helix 6
AA6
A
686 696Right-handed alpha
Helix 7
AA7
A
709 717Right-handed alpha
Helix 8
AA8
A
719 738Right-handed alpha
Helix 9
AA9
A
752 758Right-handed alpha
Helix 10
AB1
B
20 31Right-handed alpha
Helix 11
AB2
B
67 71Right-handed 310
Helix 12
AB3
B
73 79Right-handed alpha
Helix 13
AB4
B
92 98Right-handed alpha
Helix 14
AB5
B
98 110Right-handed alpha
Helix 15
AB6
B
124 128Right-handed 310
Helix 16
AB7
B
131 143Right-handed alpha
Helix 17
AB8
B
156 174Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6IF3.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 52first strand
Strand 2
B
55 64anti-parallel
Strand 3
B
7 15parallel
Strand 4
B
83 89parallel
Strand 5
B
114 120parallel
Strand 6
B
145 148parallel
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