Analysis of interatomic Contacts of Structural Units in PDB entry:
6IG0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6IG0 entry

There are 10 chains in PDB entry 6IG0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 2	LYS 757
D	ILE 3	GLY 123
C	ILE 3	GLY 123
G	THR 2	ALA 218
F	THR 2	THR 217
E	THR 2	THR 217
B	THR 2	VAL 299
H	ASN 3	ILE 355
N	A 1	A 34
J	A 7	G 39

There are 79 helices in PDB entry 6IG0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	12	Right-handed alpha
Helix 2	AA2	A	17	25	Right-handed alpha
Helix 3	AA3	A	30	39	Right-handed alpha
Helix 4	AA4	A	45	54	Right-handed alpha
Helix 5	AA5	A	69	81	Right-handed alpha
Helix 6	AA6	A	109	113	Right-handed 310
Helix 7	AA7	A	145	160	Right-handed alpha
Helix 8	AA8	A	171	181	Right-handed alpha
Helix 9	AA9	A	182	184	Right-handed 310
Helix 10	AB1	A	197	220	Right-handed alpha
Helix 11	AB2	A	231	238	Right-handed alpha
Helix 12	AB3	A	250	256	Right-handed alpha
Helix 13	AB4	A	265	291	Right-handed alpha
Helix 14	AB5	A	313	336	Right-handed alpha
Helix 15	AB6	A	363	368	Right-handed alpha
Helix 16	AB7	A	368	378	Right-handed alpha
Helix 17	AB8	A	383	391	Right-handed alpha
Helix 18	AB9	A	420	431	Right-handed alpha
Helix 19	AC1	A	458	462	Right-handed 310
Helix 20	AC2	A	494	498	Right-handed 310
Helix 21	AC3	A	522	528	Right-handed alpha
Helix 22	AC4	A	541	558	Right-handed alpha
Helix 23	AC5	A	559	564	Right-handed alpha
Helix 24	AC6	A	585	603	Right-handed alpha
Helix 25	AC7	A	621	637	Right-handed alpha
Helix 26	AC8	A	656	658	Right-handed 310
Helix 27	AC9	A	665	674	Right-handed alpha
Helix 28	AD1	A	681	695	Right-handed alpha
Helix 29	AD2	A	697	714	Right-handed alpha
Helix 30	AD3	A	718	730	Right-handed alpha
Helix 31	AD4	A	741	753	Right-handed alpha
Helix 32	AD5	D	8	20	Right-handed alpha
Helix 33	AD6	D	36	52	Right-handed alpha
Helix 34	AD7	D	52	57	Right-handed alpha
Helix 35	AD8	D	62	80	Right-handed alpha
Helix 36	AD9	D	80	90	Right-handed alpha
Helix 37	AE1	D	91	97	Right-handed alpha
Helix 38	AE2	D	101	122	Right-handed alpha
Helix 39	AE3	C	8	20	Right-handed alpha
Helix 40	AE4	C	36	52	Right-handed alpha
Helix 41	AE5	C	52	57	Right-handed alpha
Helix 42	AE6	C	62	80	Right-handed alpha
Helix 43	AE7	C	80	90	Right-handed alpha
Helix 44	AE8	C	91	97	Right-handed alpha
Helix 45	AE9	C	101	122	Right-handed alpha
Helix 46	AF1	G	49	59	Right-handed alpha
Helix 47	AF2	G	105	112	Right-handed alpha
Helix 48	AF3	G	161	178	Right-handed alpha
Helix 49	AF4	F	48	61	Right-handed alpha
Helix 50	AF5	F	71	75	Right-handed 310
Helix 51	AF6	F	78	83	Right-handed alpha
Helix 52	AF7	F	105	112	Right-handed alpha
Helix 53	AF8	F	162	178	Right-handed alpha
Helix 54	AF9	F	185	189	Right-handed 310
Helix 55	AG1	F	212	217	Right-handed alpha
Helix 56	AG2	E	48	54	Right-handed alpha
Helix 57	AG3	E	54	64	Right-handed alpha
Helix 58	AG4	E	79	84	Right-handed alpha
Helix 59	AG5	E	107	113	Right-handed alpha
Helix 60	AG6	E	162	171	Right-handed alpha
Helix 61	AG7	E	171	176	Right-handed alpha
Helix 62	AG8	E	209	217	Right-handed alpha
Helix 63	AG9	B	28	41	Right-handed alpha
Helix 64	AH1	B	45	53	Right-handed alpha
Helix 65	AH2	B	89	100	Right-handed alpha
Helix 66	AH3	B	110	117	Right-handed alpha
Helix 67	AH4	B	163	171	Right-handed alpha
Helix 68	AH5	B	224	232	Right-handed alpha
Helix 69	AH6	H	42	52	Right-handed alpha
Helix 70	AH7	H	55	64	Right-handed alpha
Helix 71	AH8	H	69	73	Right-handed 310
Helix 72	AH9	H	75	82	Right-handed alpha
Helix 73	AI1	H	128	144	Right-handed alpha
Helix 74	AI2	H	145	148	Right-handed 310
Helix 75	AI3	H	179	182	Right-handed 310
Helix 76	AI4	H	236	245	Right-handed alpha
Helix 77	AI5	H	245	259	Right-handed alpha
Helix 78	AI6	H	266	270	Right-handed 310
Helix 79	AI7	H	298	303	Right-handed 310

There are 23 sheets in PDB entry 6IG0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	311	first strand
Strand 2	A	241	243	anti-parallel
Strand 3	A	346	348	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	246	first strand
Strand 2	A	306	307	anti-parallel
Strand 3	A	300	301	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	249	first strand
Strand 2	A	340	341	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	446	448	first strand
Strand 2	A	451	456	anti-parallel
Strand 3	A	436	440	anti-parallel
Strand 4	A	469	472	anti-parallel
Strand 5	A	483	485	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	491	first strand
Strand 2	A	569	575	anti-parallel
Strand 3	A	578	584	anti-parallel
Strand 4	A	513	520	anti-parallel
Strand 5	A	609	616	anti-parallel
Strand 6	A	643	646	parallel
Strand 7	A	652	654	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	152	155	first strand
Strand 2	G	4	8	anti-parallel
Strand 3	G	200	204	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	102	103	first strand
Strand 2	G	146	149	anti-parallel
Strand 3	G	10	14	anti-parallel
Strand 4	G	193	196	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	118	122	first strand
Strand 2	G	137	141	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	97	98	first strand
Strand 2	F	151	155	anti-parallel
Strand 3	F	4	8	anti-parallel
Strand 4	F	200	204	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	146	149	first strand
Strand 2	F	10	14	anti-parallel
Strand 3	F	193	196	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	118	123	first strand
Strand 2	F	136	141	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	96	98	first strand
Strand 2	E	151	155	anti-parallel
Strand 3	E	4	14	anti-parallel
Strand 4	E	148	149	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	96	98	first strand
Strand 2	E	151	155	anti-parallel
Strand 3	E	4	14	anti-parallel
Strand 4	E	193	205	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	123	first strand
Strand 2	E	136	139	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	159	first strand
Strand 2	B	5	9	anti-parallel
Strand 3	B	190	193	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	73	first strand
Strand 2	B	105	107	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	131	first strand
Strand 2	B	145	149	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	267	first strand
Strand 2	B	211	214	anti-parallel
Strand 3	B	294	296	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	274	first strand
Strand 2	B	289	290	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	227	230	first strand
Strand 2	H	10	14	anti-parallel
Strand 3	H	347	350	anti-parallel
Strand 4	H	276	279	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	37	41	first strand
Strand 2	H	91	95	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	184	186	first strand
Strand 2	H	232	234	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	211	214	first strand
Strand 2	H	203	206	anti-parallel
Strand 3	H	316	318	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6IG0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6IG0