Analysis of interatomic Contacts of Structural Units in PDB entry:
6IGB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IGB entry

There are 2 chains in PDB entry 6IGB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 26PRO 388
B
 SER 26PRO 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 6IGB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
173 177Right-handed 310
Helix 2
AA2
B
173 177Right-handed 310
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There are 14 sheets in PDB entry 6IGB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 63first strand
Strand 2
A
42 49anti-parallel
Strand 3
A
27 34anti-parallel
Strand 4
A
379 386anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 72first strand
Strand 2
A
78 83anti-parallel
Strand 3
A
96 102anti-parallel
Strand 4
A
109 116anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
133 138anti-parallel
Strand 3
A
146 151anti-parallel
Strand 4
A
163 165anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
192 197anti-parallel
Strand 3
A
202 208anti-parallel
Strand 4
A
217 226anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 238first strand
Strand 2
A
244 249anti-parallel
Strand 3
A
254 262anti-parallel
Strand 4
A
265 273anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 290first strand
Strand 2
A
296 301anti-parallel
Strand 3
A
307 313anti-parallel
Strand 4
A
320 327anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
344 349anti-parallel
Strand 3
A
354 360anti-parallel
Strand 4
A
367 375anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 63first strand
Strand 2
B
42 49anti-parallel
Strand 3
B
27 34anti-parallel
Strand 4
B
379 386anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 72first strand
Strand 2
B
78 83anti-parallel
Strand 3
B
96 102anti-parallel
Strand 4
B
109 116anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 127first strand
Strand 2
B
133 138anti-parallel
Strand 3
B
146 151anti-parallel
Strand 4
B
163 165anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
192 197anti-parallel
Strand 3
B
202 208anti-parallel
Strand 4
B
217 226anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 238first strand
Strand 2
B
244 249anti-parallel
Strand 3
B
254 262anti-parallel
Strand 4
B
265 273anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
285 290first strand
Strand 2
B
296 301anti-parallel
Strand 3
B
307 313anti-parallel
Strand 4
B
320 327anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 338first strand
Strand 2
B
344 349anti-parallel
Strand 3
B
354 360anti-parallel
Strand 4
B
367 375anti-parallel
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