Analysis of interatomic Contacts of Structural Units in PDB entry:
6IGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IGO entry

There are 6 chains in PDB entry 6IGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ALA 37GLU 158
A
 LEU 38LYS 157
B
 GLU 39LYS 157
D
 LEU 38LYS 157
E
 GLU 39LYS 157
F
 GLU 39LYS 157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6IGO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
100 104Right-handed 310
Helix 2
AA2
C
126 129Right-handed 310
Helix 3
AA3
A
100 104Right-handed 310
Helix 4
AA4
A
126 129Right-handed 310
Helix 5
AA5
B
100 104Right-handed 310
Helix 6
AA6
B
112 116Right-handed 310
Helix 7
AA7
B
126 129Right-handed 310
Helix 8
AA8
D
126 129Right-handed 310
Helix 9
AA9
E
112 116Right-handed 310
Helix 10
AB1
E
126 129Right-handed 310
Helix 11
AB2
F
126 129Right-handed 310
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There are 18 sheets in PDB entry 6IGO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 41first strand
Strand 2
C
59 62anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 49first strand
Strand 2
C
148 155parallel
Strand 3
C
131 138anti-parallel
Strand 4
C
71 78anti-parallel
Strand 5
C
85 91anti-parallel
Strand 6
C
94 97anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 56first strand
Strand 2
C
120 122anti-parallel
Strand 3
C
107 109anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
59 61anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 49first strand
Strand 2
A
148 155parallel
Strand 3
A
131 138anti-parallel
Strand 4
A
71 78anti-parallel
Strand 5
A
85 91anti-parallel
Strand 6
A
94 97anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
120 122anti-parallel
Strand 3
A
107 109anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 41first strand
Strand 2
B
59 60anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 48first strand
Strand 2
B
148 154parallel
Strand 3
B
131 138anti-parallel
Strand 4
B
71 78anti-parallel
Strand 5
B
85 91anti-parallel
Strand 6
B
94 97anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 56first strand
Strand 2
B
120 125anti-parallel
Strand 3
B
107 109anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 41first strand
Strand 2
D
59 61anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
45 49first strand
Strand 2
D
148 155parallel
Strand 3
D
131 138anti-parallel
Strand 4
D
71 78anti-parallel
Strand 5
D
85 91anti-parallel
Strand 6
D
94 97anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
54 56first strand
Strand 2
D
120 122anti-parallel
Strand 3
D
107 109anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
40 41first strand
Strand 2
E
59 60anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
45 49first strand
Strand 2
E
148 155parallel
Strand 3
E
131 138anti-parallel
Strand 4
E
71 78anti-parallel
Strand 5
E
85 91anti-parallel
Strand 6
E
94 97anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
54 56first strand
Strand 2
E
120 122anti-parallel
Strand 3
E
107 109anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
40 41first strand
Strand 2
F
59 60anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
45 49first strand
Strand 2
F
148 155parallel
Strand 3
F
131 138anti-parallel
Strand 4
F
71 78anti-parallel
Strand 5
F
85 91anti-parallel
Strand 6
F
94 97anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
54 56first strand
Strand 2
F
120 122anti-parallel
Strand 3
F
107 109anti-parallel
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