Analysis of interatomic Contacts of Structural Units in PDB entry:
6IH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IH8 entry

There are 4 chains in PDB entry 6IH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2TYR 330
B
 LYS 2TYR 330
C
 MET 1TYR 330
D
 LYS 2TYR 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 6IH8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 21Right-handed alpha
Helix 2
AA2
A
35 44Right-handed alpha
Helix 3
AA3
A
58 64Right-handed alpha
Helix 4
AA4
A
82 89Right-handed alpha
Helix 5
AA5
A
100 117Right-handed alpha
Helix 6
AA6
A
118 128Right-handed alpha
Helix 7
AA7
A
154 165Right-handed alpha
Helix 8
AA8
A
180 188Right-handed alpha
Helix 9
AA9
A
193 201Right-handed alpha
Helix 10
AB1
A
219 226Right-handed alpha
Helix 11
AB2
A
237 241Right-handed 310
Helix 12
AB3
A
242 252Right-handed alpha
Helix 13
AB4
A
263 267Right-handed 310
Helix 14
AB5
A
278 284Right-handed alpha
Helix 15
AB6
A
298 318Right-handed alpha
Helix 16
AB7
B
12 21Right-handed alpha
Helix 17
AB8
B
35 44Right-handed alpha
Helix 18
AB9
B
58 64Right-handed alpha
Helix 19
AC1
B
82 89Right-handed alpha
Helix 20
AC2
B
100 117Right-handed alpha
Helix 21
AC3
B
118 128Right-handed alpha
Helix 22
AC4
B
154 165Right-handed alpha
Helix 23
AC5
B
166 168Right-handed 310
Helix 24
AC6
B
180 188Right-handed alpha
Helix 25
AC7
B
193 201Right-handed alpha
Helix 26
AC8
B
219 226Right-handed alpha
Helix 27
AC9
B
237 241Right-handed 310
Helix 28
AD1
B
242 252Right-handed alpha
Helix 29
AD2
B
263 267Right-handed 310
Helix 30
AD3
B
278 284Right-handed alpha
Helix 31
AD4
B
298 319Right-handed alpha
Helix 32
AD5
C
12 21Right-handed alpha
Helix 33
AD6
C
35 44Right-handed alpha
Helix 34
AD7
C
58 65Right-handed alpha
Helix 35
AD8
C
82 89Right-handed alpha
Helix 36
AD9
C
100 117Right-handed alpha
Helix 37
AE1
C
118 128Right-handed alpha
Helix 38
AE2
C
154 164Right-handed alpha
Helix 39
AE3
C
165 168Right-handed 310
Helix 40
AE4
C
179 187Right-handed alpha
Helix 41
AE5
C
193 201Right-handed alpha
Helix 42
AE6
C
219 225Right-handed alpha
Helix 43
AE7
C
237 241Right-handed 310
Helix 44
AE8
C
242 252Right-handed alpha
Helix 45
AE9
C
263 267Right-handed 310
Helix 46
AF1
C
278 284Right-handed alpha
Helix 47
AF2
C
298 318Right-handed alpha
Helix 48
AF3
D
12 21Right-handed alpha
Helix 49
AF4
D
35 44Right-handed alpha
Helix 50
AF5
D
58 64Right-handed alpha
Helix 51
AF6
D
82 89Right-handed alpha
Helix 52
AF7
D
100 117Right-handed alpha
Helix 53
AF8
D
118 128Right-handed alpha
Helix 54
AF9
D
154 165Right-handed alpha
Helix 55
AG1
D
166 168Right-handed 310
Helix 56
AG2
D
180 187Right-handed alpha
Helix 57
AG3
D
193 201Right-handed alpha
Helix 58
AG4
D
219 225Right-handed alpha
Helix 59
AG5
D
237 241Right-handed 310
Helix 60
AG6
D
242 253Right-handed alpha
Helix 61
AG7
D
263 267Right-handed 310
Helix 62
AG8
D
278 284Right-handed alpha
Helix 63
AG9
D
298 318Right-handed alpha
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There are 8 sheets in PDB entry 6IH8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
4 7parallel
Strand 3
A
48 51parallel
Strand 4
A
70 73parallel
Strand 5
A
92 94parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 191first strand
Strand 2
A
170 174parallel
Strand 3
A
147 151parallel
Strand 4
A
203 206parallel
Strand 5
A
230 234parallel
Strand 6
A
255 260parallel
Strand 7
A
288 290parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 26first strand
Strand 2
B
4 7parallel
Strand 3
B
48 51parallel
Strand 4
B
70 73parallel
Strand 5
B
92 94parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 191first strand
Strand 2
B
170 174parallel
Strand 3
B
147 151parallel
Strand 4
B
203 206parallel
Strand 5
B
230 234parallel
Strand 6
B
255 260parallel
Strand 7
B
288 290parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 26first strand
Strand 2
C
4 7parallel
Strand 3
C
48 51parallel
Strand 4
C
70 73parallel
Strand 5
C
92 94parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
189 191first strand
Strand 2
C
170 174parallel
Strand 3
C
147 151parallel
Strand 4
C
203 206parallel
Strand 5
C
230 234parallel
Strand 6
C
255 260parallel
Strand 7
C
288 290parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
24 26first strand
Strand 2
D
4 7parallel
Strand 3
D
48 51parallel
Strand 4
D
70 73parallel
Strand 5
D
92 94parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
189 191first strand
Strand 2
D
170 174parallel
Strand 3
D
147 151parallel
Strand 4
D
203 206parallel
Strand 5
D
230 234parallel
Strand 6
D
255 260parallel
Strand 7
D
288 290parallel
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