Analysis of interatomic Contacts of Structural Units in PDB entry:
6IHB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IHB entry

There are 2 chains in PDB entry 6IHB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 LYS 144LYS 237
A
 ASP 219LEU 735
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6IHB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
269 271Right-handed 310
Helix 2
AA2
A
286 290Right-handed 310
Helix 3
AA3
A
292 301Right-handed alpha
Helix 4
AA4
A
394 398Right-handed 310
Helix 5
AA5
A
469 473Right-handed 310
Helix 6
AA6
A
491 495Right-handed 310
Helix 7
AA7
A
553 555Right-handed 310
Helix 8
AA8
A
562 566Right-handed 310
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There are 13 sheets in PDB entry 6IHB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
156 160first strand
Strand 2
R
226 236parallel
Strand 3
R
214 220anti-parallel
Strand 4
R
181 188anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
174 175first strand
Strand 2
A
266 267anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 234first strand
Strand 2
A
238 249anti-parallel
Strand 3
A
672 688anti-parallel
Strand 4
A
303 326anti-parallel
Strand 5
A
329 334anti-parallel
Strand 6
A
303 326anti-parallel
Strand 7
A
409 414anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
A
238 249parallel
Strand 3
A
672 688anti-parallel
Strand 4
A
303 326anti-parallel
Strand 5
A
421 422anti-parallel
Strand 6
A
303 326anti-parallel
Strand 7
A
409 414anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 261first strand
Strand 2
A
273 282anti-parallel
Strand 3
A
374 378anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 261first strand
Strand 2
A
273 282anti-parallel
Strand 3
A
646 650anti-parallel
Strand 4
A
340 344anti-parallel
Strand 5
A
401 403anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 426first strand
Strand 2
A
731 733parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 447first strand
Strand 2
A
461 463anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
Strand 2
A
597 598anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 489first strand
Strand 2
A
533 535anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 510first strand
Strand 2
A
513 515anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 543first strand
Strand 2
A
557 559anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
618 620first strand
Strand 2
A
637 639parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il