Analysis of interatomic Contacts of Structural Units in PDB entry:
6IHD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IHD entry

There are 2 chains in PDB entry 6IHD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 306
B
 ALA 2LYS 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6IHD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
37 54Right-handed alpha
Helix 3
AA3
A
64 68Right-handed 310
Helix 4
AA4
A
89 110Right-handed alpha
Helix 5
AA5
A
121 134Right-handed alpha
Helix 6
AA6
A
142 157Right-handed alpha
Helix 7
AA7
A
160 162Right-handed 310
Helix 8
AA8
A
172 174Right-handed 310
Helix 9
AA9
A
180 182Right-handed 310
Helix 10
AB1
A
191 193Right-handed 310
Helix 11
AB2
A
196 216Right-handed alpha
Helix 12
AB3
A
219 235Right-handed alpha
Helix 13
AB4
A
271 274Right-handed 310
Helix 14
AB5
A
275 302Right-handed alpha
Helix 15
AB6
B
10 23Right-handed alpha
Helix 16
AB7
B
37 54Right-handed alpha
Helix 17
AB8
B
64 68Right-handed 310
Helix 18
AB9
B
87 110Right-handed alpha
Helix 19
AC1
B
121 134Right-handed alpha
Helix 20
AC2
B
142 158Right-handed alpha
Helix 21
AC3
B
160 162Right-handed 310
Helix 22
AC4
B
172 174Right-handed 310
Helix 23
AC5
B
191 193Right-handed 310
Helix 24
AC6
B
196 216Right-handed alpha
Helix 25
AC7
B
219 235Right-handed alpha
Helix 26
AC8
B
271 274Right-handed 310
Helix 27
AC9
B
275 301Right-handed alpha
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There are 8 sheets in PDB entry 6IHD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
28 32parallel
Strand 3
A
3 7parallel
Strand 4
A
73 76parallel
Strand 5
A
114 117parallel
Strand 6
A
137 139parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
184 185anti-parallel
Strand 3
A
188 189anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 170first strand
Strand 2
A
176 178anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 249first strand
Strand 2
A
252 262anti-parallel
Strand 3
A
266 269anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
28 32parallel
Strand 3
B
3 7parallel
Strand 4
B
73 76parallel
Strand 5
B
114 117parallel
Strand 6
B
137 139parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 170first strand
Strand 2
B
176 185anti-parallel
Strand 3
B
188 189anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 241first strand
Strand 2
B
260 262anti-parallel
Strand 3
B
266 269anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
244 249first strand
Strand 2
B
252 257anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il