Analysis of interatomic Contacts of Structural Units in PDB entry:
6IIL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IIL entry

There are 2 chains in PDB entry 6IIL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 102ILE 487
B
 GLU 102VAL 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6IIL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
113 125Right-handed alpha
Helix 2
AA2
A
126 136Right-handed alpha
Helix 3
AA3
A
146 166Right-handed alpha
Helix 4
AA4
A
172 183Right-handed alpha
Helix 5
AA5
A
184 188Right-handed 310
Helix 6
AA6
A
199 215Right-handed alpha
Helix 7
AA7
A
241 248Right-handed alpha
Helix 8
AA8
A
285 294Right-handed alpha
Helix 9
AA9
A
356 359Right-handed 310
Helix 10
AB1
A
360 378Right-handed alpha
Helix 11
AB2
A
459 465Right-handed alpha
Helix 12
AB3
A
466 468Right-handed 310
Helix 13
AB4
B
113 125Right-handed alpha
Helix 14
AB5
B
126 136Right-handed alpha
Helix 15
AB6
B
146 166Right-handed alpha
Helix 16
AB7
B
172 183Right-handed alpha
Helix 17
AB8
B
184 188Right-handed 310
Helix 18
AB9
B
199 215Right-handed alpha
Helix 19
AC1
B
241 248Right-handed alpha
Helix 20
AC2
B
285 294Right-handed alpha
Helix 21
AC3
B
303 307Right-handed 310
Helix 22
AC4
B
356 359Right-handed 310
Helix 23
AC5
B
360 367Right-handed alpha
Helix 24
AC6
B
367 376Right-handed alpha
Helix 25
AC7
B
459 465Right-handed alpha
Helix 26
AC8
B
466 468Right-handed 310
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There are 8 sheets in PDB entry 6IIL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
169 170parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 272first strand
Strand 2
A
249 257anti-parallel
Strand 3
A
307 319anti-parallel
Strand 4
A
295 302anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 278first strand
Strand 2
A
324 329parallel
Strand 3
A
474 482anti-parallel
Strand 4
A
417 427anti-parallel
Strand 5
A
352 354anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 278first strand
Strand 2
A
324 329parallel
Strand 3
A
474 482anti-parallel
Strand 4
A
417 427anti-parallel
Strand 5
A
435 443anti-parallel
Strand 6
A
446 451anti-parallel
Strand 7
A
454 458anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
169 170parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 272first strand
Strand 2
B
249 257anti-parallel
Strand 3
B
309 319anti-parallel
Strand 4
B
295 300anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 278first strand
Strand 2
B
324 329parallel
Strand 3
B
474 482anti-parallel
Strand 4
B
417 427anti-parallel
Strand 5
B
352 354anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 278first strand
Strand 2
B
324 329parallel
Strand 3
B
474 482anti-parallel
Strand 4
B
417 427anti-parallel
Strand 5
B
435 441anti-parallel
Strand 6
B
447 451anti-parallel
Strand 7
B
454 458anti-parallel
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