Analysis of interatomic Contacts of Structural Units in PDB entry:
6IIU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IIU entry

There is 1 chain in PDB entry 6IIU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1001LEU 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6IIU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1002 1020Right-handed alpha
Helix 2
AA2
A
1022 1042Right-handed alpha
Helix 3
AA3
A
1045 1049Right-handed 310
Helix 4
AA4
A
1055 1081Right-handed alpha
Helix 5
AA5
A
1083 1093Right-handed alpha
Helix 6
AA6
A
1093 1102Right-handed alpha
Helix 7
AA7
A
1103 1106Right-handed 310
Helix 8
AA8
A
18 26Right-handed alpha
Helix 9
AA9
A
27 51Right-handed alpha
Helix 10
AB1
A
61 91Right-handed alpha
Helix 11
AB2
A
94 99Right-handed alpha
Helix 12
AB3
A
102 136Right-handed alpha
Helix 13
AB4
A
142 165Right-handed alpha
Helix 14
AB5
A
166 169Right-handed 310
Helix 15
AB6
A
190 226Right-handed alpha
Helix 16
AB7
A
2019 2023Right-handed 310
Helix 17
AB8
A
2029 2033Right-handed 310
Helix 18
AB9
A
2045 2047Right-handed 310
Helix 19
AC1
A
237 271Right-handed alpha
Helix 20
AC2
A
283 311Right-handed alpha
Helix 21
AC3
A
312 318Right-handed alpha
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There are 2 sheets in PDB entry 6IIU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
182 185anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2012 2013first strand
Strand 2
A
2004 2006anti-parallel
Strand 3
A
2049 2051anti-parallel
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