Analysis of interatomic Contacts of Structural Units in PDB entry:
6IIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IIX entry

There is 1 chain in PDB entry 6IIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6IIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 11Right-handed alpha
Helix 2
AA2
A
13 15Right-handed 310
Helix 3
AA3
A
16 27Right-handed alpha
Helix 4
AA4
A
37 48Right-handed alpha
Helix 5
AA5
A
51 62Right-handed alpha
Helix 6
AA6
A
68 84Right-handed alpha
Helix 7
AA7
A
100 102Right-handed 310
Helix 8
AA8
A
103 109Right-handed alpha
Helix 9
AA9
A
109 129Right-handed alpha
Helix 10
AB1
A
132 141Right-handed alpha
Helix 11
AB2
A
141 155Right-handed alpha
Helix 12
AB3
A
161 170Right-handed alpha
Helix 13
AB4
A
205 224Right-handed alpha
Helix 14
AB5
A
237 246Right-handed 310
Helix 15
AB6
A
251 258Right-handed alpha
Helix 16
AB7
A
274 284Right-handed alpha
Helix 17
AB8
A
289 293Right-handed 310
Helix 18
AB9
A
297 309Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6IIX.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 176first strand
Strand 2
A
179 185anti-parallel
Strand 3
A
191 196anti-parallel
Strand 4
A
231 236parallel
Strand 5
A
316 321anti-parallel
Strand 6
A
261 262anti-parallel
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