Analysis of interatomic Contacts of Structural Units in PDB entry:
6IJ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IJ1 entry

There is 1 chain in PDB entry 6IJ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 9THR 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6IJ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 24Right-handed alpha
Helix 2
AA2
A
41 53Right-handed alpha
Helix 3
AA3
A
57 72Right-handed alpha
Helix 4
AA4
A
73 75Right-handed 310
Helix 5
AA5
A
90 104Right-handed alpha
Helix 6
AA6
A
111 122Right-handed alpha
Helix 7
AA7
A
133 142Right-handed alpha
Helix 8
AA8
A
157 165Right-handed alpha
Helix 9
AA9
A
172 183Right-handed alpha
Helix 10
AB1
A
197 210Right-handed alpha
Helix 11
AB2
A
215 230Right-handed alpha
Helix 12
AB3
A
245 257Right-handed alpha
Helix 13
AB4
A
264 279Right-handed alpha
Helix 14
AB5
A
300 304Right-handed 310
Helix 15
AB6
A
312 317Right-handed 310
Helix 16
AB7
A
326 342Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6IJ1.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 292first strand
Strand 2
A
319 321anti-parallel
Strand 3
A
308 309parallel
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