Analysis of interatomic Contacts of Structural Units in PDB entry:
6IJ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IJ4 entry

There is 1 chain in PDB entry 6IJ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 30LEU 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6IJ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 44Right-handed alpha
Helix 2
AA2
A
90 95Right-handed 310
Helix 3
AA3
A
96 103Right-handed alpha
Helix 4
AA4
A
119 138Right-handed alpha
Helix 5
AA5
A
160 173Right-handed alpha
Helix 6
AA6
A
214 221Right-handed alpha
Helix 7
AA7
A
246 263Right-handed alpha
Helix 8
AA8
A
265 267Right-handed 310
Helix 9
AA9
A
268 274Right-handed alpha
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There are 2 sheets in PDB entry 6IJ4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 56first strand
Strand 2
A
65 71anti-parallel
Strand 3
A
107 112anti-parallel
Strand 4
A
78 84parallel
Strand 5
A
149 159parallel
Strand 6
A
178 182parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 203first strand
Strand 2
A
227 232parallel
Strand 3
A
281 287anti-parallel
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