Analysis of interatomic Contacts of Structural Units in PDB entry:
6IJ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IJ9 entry

There are 4 chains in PDB entry 6IJ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 8LEU 435
B
 LYS 8LEU 435
C
 LYS 7LEU 435
D
 LYS 7LEU 57
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 6IJ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 35Right-handed alpha
Helix 2
AA2
A
45 49Right-handed 310
Helix 3
AA3
A
50 56Right-handed alpha
Helix 4
AA4
A
82 86Right-handed 310
Helix 5
AA5
A
87 89Right-handed 310
Helix 6
AA6
A
90 99Right-handed alpha
Helix 7
AA7
A
101 111Right-handed alpha
Helix 8
AA8
A
112 117Right-handed 310
Helix 9
AA9
A
127 138Right-handed alpha
Helix 10
AB1
A
149 159Right-handed alpha
Helix 11
AB2
A
165 174Right-handed alpha
Helix 12
AB3
A
183 186Right-handed 310
Helix 13
AB4
A
187 198Right-handed alpha
Helix 14
AB5
A
226 235Right-handed alpha
Helix 15
AB6
A
255 269Right-handed alpha
Helix 16
AB7
A
316 323Right-handed alpha
Helix 17
AB8
A
334 344Right-handed alpha
Helix 18
AB9
A
356 365Right-handed alpha
Helix 19
AC1
A
383 395Right-handed alpha
Helix 20
AC2
A
399 417Right-handed alpha
Helix 21
AC3
A
420 433Right-handed alpha
Helix 22
AC4
B
18 35Right-handed alpha
Helix 23
AC5
B
44 50Right-handed 310
Helix 24
AC6
B
51 57Right-handed alpha
Helix 25
AC7
B
82 86Right-handed 310
Helix 26
AC8
B
87 89Right-handed 310
Helix 27
AC9
B
90 100Right-handed alpha
Helix 28
AD1
B
101 111Right-handed alpha
Helix 29
AD2
B
112 117Right-handed 310
Helix 30
AD3
B
127 138Right-handed alpha
Helix 31
AD4
B
149 159Right-handed alpha
Helix 32
AD5
B
165 174Right-handed alpha
Helix 33
AD6
B
183 186Right-handed 310
Helix 34
AD7
B
187 198Right-handed alpha
Helix 35
AD8
B
226 235Right-handed alpha
Helix 36
AD9
B
255 269Right-handed alpha
Helix 37
AE1
B
316 323Right-handed alpha
Helix 38
AE2
B
334 344Right-handed alpha
Helix 39
AE3
B
356 365Right-handed alpha
Helix 40
AE4
B
383 394Right-handed alpha
Helix 41
AE5
B
399 401Right-handed 310
Helix 42
AE6
B
402 417Right-handed alpha
Helix 43
AE7
B
420 433Right-handed alpha
Helix 44
AE8
C
18 35Right-handed alpha
Helix 45
AE9
C
44 49Right-handed 310
Helix 46
AF1
C
50 56Right-handed alpha
Helix 47
AF2
C
82 86Right-handed 310
Helix 48
AF3
C
87 89Right-handed 310
Helix 49
AF4
C
90 99Right-handed alpha
Helix 50
AF5
C
101 111Right-handed alpha
Helix 51
AF6
C
112 117Right-handed 310
Helix 52
AF7
C
127 138Right-handed alpha
Helix 53
AF8
C
149 159Right-handed alpha
Helix 54
AF9
C
165 174Right-handed alpha
Helix 55
AG1
C
183 186Right-handed 310
Helix 56
AG2
C
187 198Right-handed alpha
Helix 57
AG3
C
226 236Right-handed alpha
Helix 58
AG4
C
239 241Right-handed 310
Helix 59
AG5
C
255 269Right-handed alpha
Helix 60
AG6
C
316 323Right-handed alpha
Helix 61
AG7
C
334 344Right-handed alpha
Helix 62
AG8
C
356 365Right-handed alpha
Helix 63
AG9
C
383 396Right-handed alpha
Helix 64
AH1
C
399 417Right-handed alpha
Helix 65
AH2
C
420 433Right-handed alpha
Helix 66
AH3
D
18 35Right-handed alpha
Helix 67
AH4
D
45 50Right-handed 310
Helix 68
AH5
D
51 56Right-handed alpha
Helix 69
AH6
D
82 86Right-handed 310
Helix 70
AH7
D
87 89Right-handed 310
Helix 71
AH8
D
90 99Right-handed alpha
Helix 72
AH9
D
101 112Right-handed alpha
Helix 73
AI1
D
113 117Right-handed 310
Helix 74
AI2
D
127 138Right-handed alpha
Helix 75
AI3
D
149 159Right-handed alpha
Helix 76
AI4
D
165 174Right-handed alpha
Helix 77
AI5
D
187 198Right-handed alpha
Helix 78
AI6
D
226 236Right-handed alpha
Helix 79
AI7
D
255 269Right-handed alpha
Helix 80
AI8
D
316 323Right-handed alpha
Helix 81
AI9
D
334 344Right-handed alpha
Helix 82
AJ1
D
356 365Right-handed alpha
Helix 83
AJ2
D
383 393Right-handed alpha
Helix 84
AJ3
D
400 417Right-handed alpha
Helix 85
AJ4
D
420 435Right-handed alpha
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There are 8 sheets in PDB entry 6IJ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 67first strand
Strand 2
A
38 43parallel
Strand 3
A
10 14parallel
Strand 4
A
120 124parallel
Strand 5
A
141 146parallel
Strand 6
A
177 180parallel
Strand 7
A
204 206parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 275first strand
Strand 2
A
243 247parallel
Strand 3
A
326 331parallel
Strand 4
A
347 350parallel
Strand 5
A
372 373parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 67first strand
Strand 2
B
38 43parallel
Strand 3
B
10 14parallel
Strand 4
B
120 124parallel
Strand 5
B
141 146parallel
Strand 6
B
177 180parallel
Strand 7
B
204 206parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 311first strand
Strand 2
B
272 276parallel
Strand 3
B
243 247parallel
Strand 4
B
326 331parallel
Strand 5
B
349 350parallel
Strand 6
B
372 373parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 67first strand
Strand 2
C
38 43parallel
Strand 3
C
10 14parallel
Strand 4
C
120 124parallel
Strand 5
C
141 146parallel
Strand 6
C
177 180parallel
Strand 7
C
204 206parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
272 276first strand
Strand 2
C
243 247parallel
Strand 3
C
326 331parallel
Strand 4
C
347 350parallel
Strand 5
C
372 373parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
63 67first strand
Strand 2
D
38 43parallel
Strand 3
D
10 14parallel
Strand 4
D
120 124parallel
Strand 5
D
141 146parallel
Strand 6
D
177 180parallel
Strand 7
D
204 206parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
273 276first strand
Strand 2
D
243 247parallel
Strand 3
D
326 331parallel
Strand 4
D
347 350parallel
Strand 5
D
372 373parallel
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