Analysis of interatomic Contacts of Structural Units in PDB entry:
6IJI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IJI entry

There are 2 chains in PDB entry 6IJI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 447GLU 770
B
 GLY 458GLU 769
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6IJI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
452 462Right-handed alpha
Helix 2
AA2
A
465 472Right-handed alpha
Helix 3
AA3
A
479 484Right-handed 310
Helix 4
AA4
A
485 498Right-handed alpha
Helix 5
AA5
A
504 519Right-handed alpha
Helix 6
AA6
A
526 544Right-handed alpha
Helix 7
AA7
A
549 562Right-handed alpha
Helix 8
AA8
A
571 578Right-handed alpha
Helix 9
AA9
A
580 586Right-handed alpha
Helix 10
AB1
A
589 604Right-handed alpha
Helix 11
AB2
A
615 633Right-handed alpha
Helix 12
AB3
A
634 652Right-handed alpha
Helix 13
AB4
A
658 675Right-handed alpha
Helix 14
AB5
A
676 680Right-handed 310
Helix 15
AB6
A
681 707Right-handed alpha
Helix 16
AB7
A
711 715Right-handed 310
Helix 17
AB8
A
721 733Right-handed alpha
Helix 18
AB9
A
733 745Right-handed alpha
Helix 19
AC1
A
748 768Right-handed alpha
Helix 20
AC2
B
465 469Right-handed 310
Helix 21
AC3
B
482 484Right-handed 310
Helix 22
AC4
B
485 499Right-handed alpha
Helix 23
AC5
B
504 518Right-handed alpha
Helix 24
AC6
B
526 544Right-handed alpha
Helix 25
AC7
B
549 563Right-handed alpha
Helix 26
AC8
B
571 578Right-handed alpha
Helix 27
AC9
B
580 586Right-handed alpha
Helix 28
AD1
B
589 604Right-handed alpha
Helix 29
AD2
B
615 633Right-handed alpha
Helix 30
AD3
B
634 652Right-handed alpha
Helix 31
AD4
B
658 675Right-handed alpha
Helix 32
AD5
B
676 680Right-handed 310
Helix 33
AD6
B
681 705Right-handed alpha
Helix 34
AD7
B
711 720Right-handed 310
Helix 35
AD8
B
721 733Right-handed alpha
Helix 36
AD9
B
733 745Right-handed alpha
Helix 37
AE1
B
748 768Right-handed alpha
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There are no sheets in PDB entry 6IJI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il