Analysis of interatomic Contacts of Structural Units in PDB entry:
6IJP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IJP entry

There is 1 chain in PDB entry 6IJP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0HIS 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6IJP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 7Right-handed alpha
Helix 2
AA2
A
17 19Right-handed 310
Helix 3
AA3
A
21 36Right-handed alpha
Helix 4
AA4
A
39 50Right-handed alpha
Helix 5
AA5
A
53 69Right-handed alpha
Helix 6
AA6
A
70 88Right-handed alpha
Helix 7
AA7
A
102 106Right-handed 310
Helix 8
AA8
A
108 122Right-handed alpha
Helix 9
AA9
A
164 178Right-handed alpha
Helix 10
AB1
A
179 181Right-handed 310
Helix 11
AB2
A
196 210Right-handed alpha
Helix 12
AB3
A
223 234Right-handed alpha
Helix 13
AB4
A
245 256Right-handed alpha
Helix 14
AB5
A
262 269Right-handed alpha
Helix 15
AB6
A
274 278Right-handed 310
Helix 16
AB7
A
279 286Right-handed alpha
Helix 17
AB8
A
303 316Right-handed alpha
Helix 18
AB9
A
318 329Right-handed alpha
Helix 19
AC1
A
330 333Right-handed 310
Helix 20
AC2
A
336 351Right-handed alpha
Helix 21
AC3
A
352 354Right-handed 310
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There are 2 sheets in PDB entry 6IJP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 15first strand
Strand 2
A
90 97parallel
Strand 3
A
150 160parallel
Strand 4
A
127 129parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 15first strand
Strand 2
A
90 97parallel
Strand 3
A
150 160parallel
Strand 4
A
183 189parallel
Strand 5
A
213 218parallel
Strand 6
A
237 240parallel
Strand 7
A
259 261parallel
Strand 8
A
290 292parallel
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