Analysis of interatomic Contacts of Structural Units in PDB entry:
6IJZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IJZ entry

There are 2 chains in PDB entry 6IJZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3PHE 717
B
 THR 3PHE 717
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 6IJZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 30Right-handed alpha
Helix 2
AA2
A
34 39Right-handed alpha
Helix 3
AA3
A
39 45Right-handed alpha
Helix 4
AA4
A
77 81Right-handed 310
Helix 5
AA5
A
83 91Right-handed alpha
Helix 6
AA6
A
93 125Right-handed alpha
Helix 7
AA7
A
158 193Right-handed alpha
Helix 8
AA8
A
216 229Right-handed alpha
Helix 9
AA9
A
242 267Right-handed alpha
Helix 10
AB1
A
290 310Right-handed alpha
Helix 11
AB2
A
329 337Right-handed alpha
Helix 12
AB3
A
367 369Right-handed 310
Helix 13
AB4
A
370 389Right-handed alpha
Helix 14
AB5
A
389 401Right-handed alpha
Helix 15
AB6
A
402 407Right-handed alpha
Helix 16
AB7
A
420 428Right-handed alpha
Helix 17
AB8
A
428 438Right-handed alpha
Helix 18
AB9
A
440 452Right-handed alpha
Helix 19
AC1
A
456 475Right-handed alpha
Helix 20
AC2
A
477 489Right-handed alpha
Helix 21
AC3
A
489 496Right-handed alpha
Helix 22
AC4
A
500 512Right-handed alpha
Helix 23
AC5
A
513 523Right-handed alpha
Helix 24
AC6
A
524 530Right-handed alpha
Helix 25
AC7
A
534 547Right-handed alpha
Helix 26
AC8
A
555 560Right-handed 310
Helix 27
AC9
A
569 583Right-handed alpha
Helix 28
AD1
A
590 612Right-handed alpha
Helix 29
AD2
A
623 647Right-handed alpha
Helix 30
AD3
A
651 655Right-handed 310
Helix 31
AD4
A
659 676Right-handed alpha
Helix 32
AD5
A
677 680Right-handed 310
Helix 33
AD6
A
684 699Right-handed alpha
Helix 34
AD7
A
704 709Right-handed alpha
Helix 35
AD8
B
4 30Right-handed alpha
Helix 36
AD9
B
34 39Right-handed alpha
Helix 37
AE1
B
39 45Right-handed alpha
Helix 38
AE2
B
77 81Right-handed 310
Helix 39
AE3
B
83 91Right-handed alpha
Helix 40
AE4
B
93 125Right-handed alpha
Helix 41
AE5
B
158 193Right-handed alpha
Helix 42
AE6
B
216 229Right-handed alpha
Helix 43
AE7
B
242 267Right-handed alpha
Helix 44
AE8
B
290 310Right-handed alpha
Helix 45
AE9
B
329 337Right-handed alpha
Helix 46
AF1
B
367 369Right-handed 310
Helix 47
AF2
B
370 389Right-handed alpha
Helix 48
AF3
B
389 401Right-handed alpha
Helix 49
AF4
B
402 407Right-handed alpha
Helix 50
AF5
B
420 428Right-handed alpha
Helix 51
AF6
B
428 438Right-handed alpha
Helix 52
AF7
B
440 452Right-handed alpha
Helix 53
AF8
B
456 475Right-handed alpha
Helix 54
AF9
B
477 489Right-handed alpha
Helix 55
AG1
B
489 496Right-handed alpha
Helix 56
AG2
B
500 512Right-handed alpha
Helix 57
AG3
B
513 523Right-handed alpha
Helix 58
AG4
B
524 530Right-handed alpha
Helix 59
AG5
B
534 547Right-handed alpha
Helix 60
AG6
B
555 560Right-handed 310
Helix 61
AG7
B
569 583Right-handed alpha
Helix 62
AG8
B
590 612Right-handed alpha
Helix 63
AG9
B
623 647Right-handed alpha
Helix 64
AH1
B
651 655Right-handed 310
Helix 65
AH2
B
659 676Right-handed alpha
Helix 66
AH3
B
677 680Right-handed 310
Helix 67
AH4
B
684 699Right-handed alpha
Helix 68
AH5
B
704 709Right-handed alpha
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There are 2 sheets in PDB entry 6IJZ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 205first strand
Strand 2
A
319 326anti-parallel
Strand 3
A
238 240anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 205first strand
Strand 2
B
319 326anti-parallel
Strand 3
B
238 240anti-parallel
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