Analysis of interatomic Contacts of Structural Units in PDB entry:
6ILR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ILR entry

There are 2 chains in PDB entry 6ILR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 67SER 378
B
 MET 67ILE 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6ILR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
106 118Right-handed alpha
Helix 2
AA2
A
131 142Right-handed alpha
Helix 3
AA3
A
181 186Right-handed alpha
Helix 4
AA4
A
192 201Right-handed alpha
Helix 5
AA5
A
212 227Right-handed alpha
Helix 6
AA6
A
242 247Right-handed alpha
Helix 7
AA7
A
255 262Right-handed alpha
Helix 8
AA8
A
269 283Right-handed alpha
Helix 9
AA9
A
293 295Right-handed 310
Helix 10
AB1
A
322 337Right-handed alpha
Helix 11
AB2
A
340 356Right-handed alpha
Helix 12
AB3
A
367 375Right-handed alpha
Helix 13
AB4
B
106 118Right-handed alpha
Helix 14
AB5
B
131 142Right-handed alpha
Helix 15
AB6
B
181 186Right-handed alpha
Helix 16
AB7
B
192 201Right-handed alpha
Helix 17
AB8
B
212 225Right-handed alpha
Helix 18
AB9
B
242 247Right-handed alpha
Helix 19
AC1
B
255 264Right-handed alpha
Helix 20
AC2
B
269 283Right-handed alpha
Helix 21
AC3
B
293 295Right-handed 310
Helix 22
AC4
B
322 337Right-handed alpha
Helix 23
AC5
B
340 356Right-handed alpha
Helix 24
AC6
B
361 365Right-handed 310
Helix 25
AC7
B
367 379Right-handed alpha
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There are 6 sheets in PDB entry 6ILR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 125first strand
Strand 2
A
71 74parallel
Strand 3
A
204 209parallel
Strand 4
A
230 236parallel
Strand 5
A
251 253parallel
Strand 6
A
287 291parallel
Strand 7
A
297 301anti-parallel
Strand 8
A
307 309anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 105first strand
Strand 2
A
78 84anti-parallel
Strand 3
A
162 168parallel
Strand 4
A
174 179anti-parallel
Strand 5
B
94 96parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 96first strand
Strand 2
B
174 179parallel
Strand 3
B
162 168anti-parallel
Strand 4
B
78 84parallel
Strand 5
B
99 105anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 129first strand
Strand 2
A
154 156parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 125first strand
Strand 2
B
71 74parallel
Strand 3
B
204 209parallel
Strand 4
B
230 236parallel
Strand 5
B
251 253parallel
Strand 6
B
287 291parallel
Strand 7
B
297 301anti-parallel
Strand 8
B
307 309anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 129first strand
Strand 2
B
154 156parallel
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