Analysis of interatomic Contacts of Structural Units in PDB entry:
6IMM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6IMM entry

There are 12 chains in PDB entry 6IMM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
N	PHE 1	THR 435
P	PHE 1	THR 363
R	ALA 8	LEU 54
T	PHE 1	THR 435
V	PHE 1	THR 363
X	ALA 8	LEU 54
Z	PHE 1	THR 435
a	PHE 1	THR 435
d	PHE 1	THR 363
e	PHE 1	THR 363
h	ALA 8	LEU 54
i	ALA 8	LEU 54

There are 25 helices in PDB entry 6IMM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	N	238	247	Right-handed alpha
Helix 2	AA2	N	403	435	Right-handed alpha
Helix 3	AA3	P	316	325	Right-handed alpha
Helix 4	AA4	P	328	360	Right-handed alpha
Helix 5	AA5	R	32	40	Right-handed alpha
Helix 6	AA6	R	45	54	Right-handed alpha
Helix 7	AA7	T	238	246	Right-handed alpha
Helix 8	AA8	T	403	416	Right-handed alpha
Helix 9	AA9	T	418	435	Right-handed alpha
Helix 10	AB1	V	316	325	Right-handed alpha
Helix 11	AB2	V	328	362	Right-handed alpha
Helix 12	AB3	X	32	39	Right-handed alpha
Helix 13	AB4	X	45	54	Right-handed alpha
Helix 14	AB5	Z	238	247	Right-handed alpha
Helix 15	AB6	Z	403	434	Right-handed alpha
Helix 16	AB7	a	240	245	Right-handed alpha
Helix 17	AB8	a	403	435	Right-handed alpha
Helix 18	AB9	d	316	325	Right-handed alpha
Helix 19	AC1	d	328	361	Right-handed alpha
Helix 20	AC2	e	316	328	Right-handed alpha
Helix 21	AC3	e	328	362	Right-handed alpha
Helix 22	AC4	h	32	40	Right-handed alpha
Helix 23	AC5	h	45	54	Right-handed alpha
Helix 24	AC6	i	32	39	Right-handed alpha
Helix 25	AC7	i	45	54	Right-handed alpha

There are 73 sheets in PDB entry 6IMM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1, AH2, AH3, AH4, AH5, AH6, AH7, AH8, AH9, AI1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	2	3	first strand
Strand 2	N	275	281	anti-parallel
Strand 3	N	6	8	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	2	3	first strand
Strand 2	N	275	281	anti-parallel
Strand 3	N	160	163	anti-parallel
Strand 4	N	154	155	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	15	19	first strand
Strand 2	N	27	33	anti-parallel
Strand 3	N	133	137	anti-parallel
Strand 4	N	140	143	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	37	38	first strand
Strand 2	N	267	269	anti-parallel
Strand 3	N	260	262	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	40	48	first strand
Strand 2	N	119	127	anti-parallel
Strand 3	N	176	179	anti-parallel
Strand 4	N	184	185	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	51	54	first strand
Strand 2	N	107	110	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	59	61	first strand
Strand 2	N	101	103	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	220	221	first strand
Strand 2	N	233	234	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	297	303	first strand
Strand 2	N	316	321	anti-parallel
Strand 3	N	349	350	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	331	332	first strand
Strand 2	N	367	368	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	9	11	first strand
Strand 2	P	20	22	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	28	30	first strand
Strand 2	P	37	41	anti-parallel
Strand 3	P	95	99	anti-parallel
Strand 4	P	85	92	anti-parallel
Strand 5	P	80	81	anti-parallel
Strand 6	P	106	108	anti-parallel
Strand 7	P	120	121	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	145	149	first strand
Strand 2	P	227	231	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	202	203	first strand
Strand 2	P	162	164	anti-parallel
Strand 3	P	218	219	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	240	244	first strand
Strand 2	P	247	251	anti-parallel
Strand 3	P	281	285	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	272	276	first strand
Strand 2	P	258	263	anti-parallel
Strand 3	P	292	295	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	2	8	first strand
Strand 2	T	275	281	anti-parallel
Strand 3	T	160	163	anti-parallel
Strand 4	T	149	155	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	16	19	first strand
Strand 2	T	27	32	anti-parallel
Strand 3	T	134	137	anti-parallel
Strand 4	T	140	143	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	40	44	first strand
Strand 2	T	122	127	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	51	54	first strand
Strand 2	T	101	110	anti-parallel
Strand 3	T	59	61	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	51	54	first strand
Strand 2	T	101	110	anti-parallel
Strand 3	T	77	79	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	178	179	first strand
Strand 2	T	184	185	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	220	221	first strand
Strand 2	T	233	234	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	260	262	first strand
Strand 2	T	267	269	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	296	301	first strand
Strand 2	T	316	322	anti-parallel
Strand 3	T	353	354	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	327	329	first strand
Strand 2	T	343	345	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	331	332	first strand
Strand 2	T	366	368	anti-parallel
Strand 3	T	373	375	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	362	363	first strand
Strand 2	T	378	379	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	387	388	first strand
Strand 2	V	304	305	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	9	11	first strand
Strand 2	V	20	22	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	29	30	first strand
Strand 2	V	37	41	anti-parallel
Strand 3	V	95	99	anti-parallel
Strand 4	V	87	90	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	58	59	first strand
Strand 2	V	73	74	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	80	81	first strand
Strand 2	V	106	108	anti-parallel
Strand 3	V	120	121	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	145	148	first strand
Strand 2	V	228	231	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	202	203	first strand
Strand 2	V	162	164	anti-parallel
Strand 3	V	218	219	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	243	244	first strand
Strand 2	V	247	251	anti-parallel
Strand 3	V	281	285	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	272	276	first strand
Strand 2	V	258	263	anti-parallel
Strand 3	V	292	295	anti-parallel
Strand 4	V	301	302	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	9	10	first strand
Strand 2	X	17	18	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	2	3	first strand
Strand 2	Z	278	281	anti-parallel
Strand 3	Z	160	163	anti-parallel
Strand 4	Z	154	155	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	16	19	first strand
Strand 2	Z	27	32	anti-parallel
Strand 3	Z	134	137	anti-parallel
Strand 4	Z	140	143	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	37	38	first strand
Strand 2	Z	268	269	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	40	48	first strand
Strand 2	Z	119	127	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	59	61	first strand
Strand 2	Z	101	103	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	178	179	first strand
Strand 2	Z	184	185	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	219	221	first strand
Strand 2	Z	233	235	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	300	303	first strand
Strand 2	Z	316	321	anti-parallel
Strand 3	Z	349	350	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	300	303	first strand
Strand 2	Z	316	321	anti-parallel
Strand 3	Z	353	354	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	331	332	first strand
Strand 2	Z	364	368	anti-parallel
Strand 3	Z	373	377	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	387	388	first strand
Strand 2	d	304	305	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	2	8	first strand
Strand 2	a	275	281	anti-parallel
Strand 3	a	160	163	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	14	19	first strand
Strand 2	a	27	32	anti-parallel
Strand 3	a	134	137	anti-parallel
Strand 4	a	140	143	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	40	46	first strand
Strand 2	a	120	127	anti-parallel
Strand 3	a	176	179	anti-parallel
Strand 4	a	184	185	anti-parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	51	54	first strand
Strand 2	a	104	110	anti-parallel
Strand 3	a	77	79	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	203	204	first strand
Strand 2	a	214	215	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	220	221	first strand
Strand 2	a	233	234	anti-parallel

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There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	260	262	first strand
Strand 2	a	267	269	anti-parallel

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There are 3 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	296	303	first strand
Strand 2	a	314	322	anti-parallel
Strand 3	a	353	356	anti-parallel

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There are 3 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	331	332	first strand
Strand 2	a	362	368	anti-parallel
Strand 3	a	373	379	anti-parallel

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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	387	388	first strand
Strand 2	e	304	305	anti-parallel

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There are 2 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	9	10	first strand
Strand 2	d	21	22	anti-parallel

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There are 6 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	29	30	first strand
Strand 2	d	37	41	anti-parallel
Strand 3	d	95	99	anti-parallel
Strand 4	d	85	91	anti-parallel
Strand 5	d	80	81	anti-parallel
Strand 6	d	107	108	anti-parallel

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There are 2 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	145	149	first strand
Strand 2	d	227	231	anti-parallel

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There are 2 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	163	164	first strand
Strand 2	d	202	203	anti-parallel

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There are 3 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	240	244	first strand
Strand 2	d	247	263	anti-parallel
Strand 3	d	272	284	anti-parallel

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There are 4 strands in AH2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	240	244	first strand
Strand 2	d	247	263	anti-parallel
Strand 3	d	292	295	anti-parallel
Strand 4	d	301	302	anti-parallel

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There are 2 strands in AH3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	9	11	first strand
Strand 2	e	20	22	anti-parallel

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There are 7 strands in AH4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	28	30	first strand
Strand 2	e	37	41	anti-parallel
Strand 3	e	95	99	anti-parallel
Strand 4	e	85	92	anti-parallel
Strand 5	e	80	81	anti-parallel
Strand 6	e	106	108	anti-parallel
Strand 7	e	120	121	anti-parallel

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There are 2 strands in AH5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	61	62	first strand
Strand 2	e	70	71	anti-parallel

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There are 2 strands in AH6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	146	149	first strand
Strand 2	e	227	230	anti-parallel

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There are 3 strands in AH7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	202	203	first strand
Strand 2	e	161	164	anti-parallel
Strand 3	e	218	220	anti-parallel

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There are 3 strands in AH8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	240	244	first strand
Strand 2	e	247	263	anti-parallel
Strand 3	e	272	285	anti-parallel

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There are 4 strands in AH9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	240	244	first strand
Strand 2	e	247	263	anti-parallel
Strand 3	e	292	295	anti-parallel
Strand 4	e	301	302	anti-parallel

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There are 2 strands in AI1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	9	10	first strand
Strand 2	i	17	18	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6IMM

Analysis of interatomic Contacts of Structural Units in PDB entry:
6IMM