Analysis of interatomic Contacts of Structural Units in PDB entry:
6IMP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IMP entry

There are 2 chains in PDB entry 6IMP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2908PHE 3204
B
 VAL 2911LEU 3203
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6IMP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2927 2939Right-handed alpha
Helix 2
AA2
A
2940 2946Right-handed alpha
Helix 3
AA3
A
2948 2961Right-handed alpha
Helix 4
AA4
A
3008 3022Right-handed alpha
Helix 5
AA5
A
3043 3062Right-handed alpha
Helix 6
AA6
A
3065 3067Right-handed 310
Helix 7
AA7
A
3076 3090Right-handed alpha
Helix 8
AA8
A
3106 3114Right-handed alpha
Helix 9
AA9
A
3120 3130Right-handed alpha
Helix 10
AB1
A
3135 3141Right-handed alpha
Helix 11
AB2
A
3156 3172Right-handed alpha
Helix 12
AB3
A
3187 3200Right-handed alpha
Helix 13
AB4
A
3201 3203Right-handed 310
Helix 14
AB5
B
2927 2938Right-handed alpha
Helix 15
AB6
B
2940 2946Right-handed alpha
Helix 16
AB7
B
2948 2962Right-handed alpha
Helix 17
AB8
B
3008 3015Right-handed alpha
Helix 18
AB9
B
3016 3023Right-handed alpha
Helix 19
AC1
B
3043 3061Right-handed alpha
Helix 20
AC2
B
3065 3067Right-handed 310
Helix 21
AC3
B
3076 3090Right-handed alpha
Helix 22
AC4
B
3106 3115Right-handed alpha
Helix 23
AC5
B
3120 3130Right-handed alpha
Helix 24
AC6
B
3135 3141Right-handed alpha
Helix 25
AC7
B
3156 3173Right-handed alpha
Helix 26
AC8
B
3187 3201Right-handed alpha
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There are 2 sheets in PDB entry 6IMP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2964 2970first strand
Strand 2
A
2975 2981anti-parallel
Strand 3
A
3026 3030anti-parallel
Strand 4
A
2998 3002parallel
Strand 5
A
3069 3074parallel
Strand 6
A
3097 3101parallel
Strand 7
A
3149 3153parallel
Strand 8
A
3179 3180parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2964 2970first strand
Strand 2
B
2975 2981anti-parallel
Strand 3
B
3026 3030anti-parallel
Strand 4
B
2998 3002parallel
Strand 5
B
3069 3074parallel
Strand 6
B
3097 3101parallel
Strand 7
B
3149 3152parallel
Strand 8
B
3176 3177parallel
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